Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02701 ATGGATTCAACTTTTGTAACCTTGAATGCCAGTGCTAATCTAGTTTGTAAGGAAGTTGCAAGAAACAGATGTTCTGGATTCTGTGGTGAAAATACAAGGGGAAGTCTGAACAACAGATTTTGTAGTATCCAACCATGCAAGAGTTCAAAAACTAGAAGGTTCAAGCCTGGCTTTGTGCATGCTGTTTACACACCAGACATCAACAAGGAGTACACATCAGACATCAACAAGGAGTACACACCAGACATCAACAAAGAATCTCTGATATTCCAGGAACCAATTTTTCAGAGTCCAAAAGCAAATCCAGAAAATATAGCAGCCATCATATTGGGTGGAGGTGCTGGAACTCGACTCTTTCCTCTTACTAGCAGAAGAGCTAAGCCTGCTGTTCCAATTGGAGGGTGTTACAGACTCATAGATATTCCAATGAGCAATTGCATCAACAGTGGCATCAGAAAAGTATATGTTTTAACACAGTACAATTCTTTCTCCCTCAATGGCCACCTGTCTCGCACATATGGTTTTGGAAATGGTGTGAATTTTGGAGATGGTTTTGTGGAGGTCTTGGCTGCTACTCAAACTCCTGGAGAGGCAGGGAACAAATGGTTCCAAGGGACAGCAGATGCTGTGAGACGATTTATATGGGTTTTTGAGGATGCCAAGAACAAGAACATTGAGCATATATTGATAGTTTCTGGTGATCATCTTTGCCGGATGGATTATTTGAAGTTTGTGGAGAAACATATTGGGACAAATGCTGATATCACAGTTTCATGTGTACCTATGAATGAAAGCCGTGCATCAGATTATGGGCTGATGAAAATTGATAGAAGGGGACGGATTATTCAGTTTGAAGATAAACCAAAGGGATTAGATCTGAAGGCAATGCAAGTTGACACCACTCTCCTTGGGTTATCAGCAGAAGAAGCACACAAAAATCCTTACATTGCATCCATGGGTGTTTATGTATTTAGAACTGAGACCCTGCTGAAACTATTAAGATGGAGCTGTCCTACATGTAATGATTTTGGATCTGAACTTATCCCATCTGCTTTGAGGGACCACAAAGTCCAAGCATATATGTTCAGGGACTACTGGAAAGATATTGGAACAATAAAGTCATTCTTTGATGCAAATCTAGCCCTAACAGGAGAGATTGTGGACGCGATTATTTCTCATGGTTGCTTCTTGAGTGAGTGTAGTGTTCAACGTTCTATTGTTGGTGTACGCTCACGATTAGAGTCCGGTGTAGAGCTTCAGGATACTATGATGATGGGTGCTGATTACTACCAAACTGATTCTGAAACTGCAACTTTACTGGCAAAAGGAAAGGTACCAGTTGGTGTTGGAGAGAATACCAAAATCAGGAACTGTATAATTGACAAGAATGCCAAGATAGGAAGAAATGTGATTATTGCAAATGTTGATGGTGTTCAAGAAGCAGACAGGCCTATGGAAGGATTCTACATTAGGTCAGGCATCATAGTTATAGTGAAGAACGCAACAATTAAAGATGGAACAATCATCTGA 1530 0.4059 MDSTFVTLNASANLVCKEVARNRCSGFCGENTRGSLNNRFCSIQPCKSSKTRRFKPGFVHAVYTPDINKEYTSDINKEYTPDINKESLIFQEPIFQSPKANPENIAAIILGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDIPMSNCINSGIRKVYVLTQYNSFSLNGHLSRTYGFGNGVNFGDGFVEVLAATQTPGEAGNKWFQGTADAVRRFIWVFEDAKNKNIEHILIVSGDHLCRMDYLKFVEKHIGTNADITVSCVPMNESRASDYGLMKIDRRGRIIQFEDKPKGLDLKAMQVDTTLLGLSAEEAHKNPYIASMGVYVFRTETLLKLLRWSCPTCNDFGSELIPSALRDHKVQAYMFRDYWKDIGTIKSFFDANLALTGEIVDAIISHGCFLSECSVQRSIVGVRSRLESGVELQDTMMMGADYYQTDSETATLLAKGKVPVGVGENTKIRNCIIDKNAKIGRNVIIANVDGVQEADRPMEGFYIRSGIIVIVKNATIKDGTII* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02701 509 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 102 381 IPR029044 -
Rops9g02701 509 SUPERFAMILY Nucleotide-diphospho-sugar transferases 104 470 IPR029044 -
Rops9g02701 509 SUPERFAMILY Trimeric LpxA-like enzymes 384 509 IPR011004 -
Rops9g02701 509 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 317 327 IPR005836 GO:0005978|GO:0008878
Rops9g02701 509 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 111 130 IPR005836 GO:0005978|GO:0008878
Rops9g02701 509 CDD ADP_Glucose_PP 107 369 - -
Rops9g02701 509 CDD LbH_G1P_AT_C 383 503 - -
Rops9g02701 509 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 202 210 IPR005836 GO:0005978|GO:0008878
Rops9g02701 509 Gene3D Hexapeptide repeat proteins 382 509 - -
Rops9g02701 509 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 52 383 IPR011831 GO:0005978|GO:0008878
Rops9g02701 509 Pfam Nucleotidyl transferase 107 383 IPR005835 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02701 Rops-Chr9 50767595 50771988 Dispersed/Wgd