Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02686 ATGTCTGGACCGATTGATCGGTTCGCTCTTCCCTGCTTTGAAGGATTCTCTGGTAATGATGAAAGAAGAGAGAGGAAATCAGATTTTGAGAATTCAGAGGATGATCGGCGCACAAGAATTGGGAGTTTGAAAAAGAAAGCAATAAATGCGTCGAGTAAATTCAGGCATTCCCTTAGGAAGAAAAGCAGTAGGAAGAATGCCAGTCGTAGTAATTCTGTTTCCATTGCGGATGTTCGCGATGTTAAGGAGCTGCAAGCAGTGGATGCATTTCGACAAGCACTGATGCCAGATAATTTGTTGCCACCAAGACATGATGACTATCATATGTTATTGAGATTCTTGAAAGCAAGGAAATTTGATATTGAGAAAGCAAAGCACATGTGGGCCAACATGATCCAATGGAGGAAAGACTATGGTACCGATACAATTATGGAGGATTTTGAATTCATTGAGTTGAATGAAGTCCTGCAATACTATCCACATGGTTATCATGGTGTAGATAAGGAAGGAAGACCTGTTTATATTGAGAGGCTAGGAAAAGTTGATCCCAATAAGCTTATGCAAGTAACTACCATGGAAAGGTATTTGAGATACCATGTGCAGGGTTTTGAGAAAACGTTTGCTATTAAGTTTCCTGCATGTTCTATTGCTGCAAAGAGACATATAGATTCAAGTACAACCATTTTGGATGTTCATGGCGTGGGTTTCAAAAACCTAACCAAGTCTGCACGGGAACTCATCATGCGGCTGCAGAAAATCGATGGTGACTATTATCCTGAAACATTGTGCCGAATGTTTATAATCAATGCTGGTCCTGGTTTTAAGCTACTTTGGAACACGGTGAAAACATTTCTTGATCCCAAAACTACTTCAAAGATAAATGTTCTCGGAAACAAGTTCCAGAATAAATTACTTGAGATTATTGATGTGAGTGAGCTGCCAGAATTTCTAGGTGGTAGTTGTGATTGTAAAGATCAAGGTGGTTGTATGAGGTCTGATAAAGGGCCATGGCAAGATCCAAACATTTTAAAGATGGTTCTTAGTGGTGAAATACAATGTTCTAGAAAAATCGTAACGGTTTCTAATGATGAAGGGACAGTGATTGAATGTGATAAGGCATGTTATCCAATGATAAGAAGTAGTGATACATCGGCAGAATCAGGATCTGAGGTTGAAGATATTACTTCCCCCAAAGCAAGTGGGAATTATACAAACCCTAGGTTGACTCCTGTCCATGAAGAAGCAAGATTGGCTGGTAGGGCTAGTCATTCTGGTGGTTTCTGTGAGTATGATGAGTATGTTCCCATGGTTGACAAGACTGTCGATGTTGGATGGAAGGAAAAACAAGCAACATTTCAAAACTCATTTGGCTCAACAGAAAAGCATCTATTGAGGACTGGAAGATCTCATGGAAATTGTGCATATATCTGGGCTATTATAGTGGGCTTCTTTGTTGCCATTTTTACTTTTGTTCGTTCTATAGCATTTCGTGTGACTAAGGGAGTACAGGACCCTGAATCTGACTCTGCCCAAAACATGCCTAACATGACTGTTGATTCCATAACCAAGGAGGAATCTCGTCCCCCATCACCTGTTCCCAGATTCACAAAGGCAGAACTCATCTCGTCTGCTTTGAAAAGCCTCGGTGAACTTGAAGAGAAGGTTGACATGCTTCAGTCAAAACCTAATGTGATGCCATATGAGAAAGAGGAGCTGCTCAATGCCGCTGTTTATCGTGTAGATGCATTGGAAGCAGAACTGATCACTACAAAGAAGGCTTTATACGAAGCTTTGATCAGACAAGAAGAACTTCTGGCATACATAGATAGTCAAGAAAGAAGCAAATTTGAGAAAAAGAAGTTTTGCTGGTGA 1872 0.4038 MSGPIDRFALPCFEGFSGNDERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSSRKNASRSNSVSIADVRDVKELQAVDAFRQALMPDNLLPPRHDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKDYGTDTIMEDFEFIELNEVLQYYPHGYHGVDKEGRPVYIERLGKVDPNKLMQVTTMERYLRYHVQGFEKTFAIKFPACSIAAKRHIDSSTTILDVHGVGFKNLTKSARELIMRLQKIDGDYYPETLCRMFIINAGPGFKLLWNTVKTFLDPKTTSKINVLGNKFQNKLLEIIDVSELPEFLGGSCDCKDQGGCMRSDKGPWQDPNILKMVLSGEIQCSRKIVTVSNDEGTVIECDKACYPMIRSSDTSAESGSEVEDITSPKASGNYTNPRLTPVHEEARLAGRASHSGGFCEYDEYVPMVDKTVDVGWKEKQATFQNSFGSTEKHLLRTGRSHGNCAYIWAIIVGFFVAIFTFVRSIAFRVTKGVQDPESDSAQNMPNMTVDSITKEESRPPSPVPRFTKAELISSALKSLGELEEKVDMLQSKPNVMPYEKEELLNAAVYRVDALEAELITTKKALYEALIRQEELLAYIDSQERSKFEKKKFCW* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02686 623 Gene3D - 54 138 - -
Rops9g02686 623 SMART sec14_4 151 322 IPR001251 -
Rops9g02686 623 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 151 325 IPR001251 -
Rops9g02686 623 MobiDBLite consensus disorder prediction 381 406 - -
Rops9g02686 623 SMART CRAL_TRIO_N_2 106 131 IPR011074 -
Rops9g02686 623 SUPERFAMILY CRAL/TRIO domain 153 345 IPR036865 -
Rops9g02686 623 PRINTS Cellular retinaldehyde-binding protein signature 278 297 - -
Rops9g02686 623 PRINTS Cellular retinaldehyde-binding protein signature 109 131 - -
Rops9g02686 623 Pfam CRAL/TRIO, N-terminal domain 105 130 IPR011074 -
Rops9g02686 623 Coils Coil 541 561 - -
Rops9g02686 623 Pfam CRAL/TRIO domain 157 319 IPR001251 -
Rops9g02686 623 CDD SEC14 152 319 IPR001251 -
Rops9g02686 623 MobiDBLite consensus disorder prediction 17 42 - -
Rops9g02686 623 FunFam SEC14 cytosolic factor 139 351 - -
Rops9g02686 623 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 24 611 - -
Rops9g02686 623 SUPERFAMILY CRAL/TRIO N-terminal domain 81 147 IPR036273 -
Rops9g02686 623 Gene3D - 139 349 IPR036865 -
Rops9g02686 623 MobiDBLite consensus disorder prediction 1 72 - -
Rops9g02686 623 MobiDBLite consensus disorder prediction 49 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02686 Rops-Chr9 50587221 50597160 Dispersed/Wgd