Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02656 ATGGCAGAAGAGGGACAAGTGATCGGTGTTCACAGCGTTGAGTCATGGAAGGAGCAGATCCAGAAGGGAGAAGAATCCAAGAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGTGGTCCATGCCGTTTTATTGCTCCAATTCTAGCAGAAATTGCTAAAAAGACACCTGAAGTCATCTTCCTCAAGGTGGATGTGGATGAACTGAAGACTGTTGCTGAGGAATGGTCAATTGAGGCTATGCCAACTTTCTTGTTCTTGAAAGAAGGCAAGATAGTGGACAAGGTAGTGGGTGCTAAGAAGGAAGAGCTGCAACTTACAATAGCCAAGCATGCAGGTGCAACTGTTGCTGCTACTTGA 360 0.4556 MAEEGQVIGVHSVESWKEQIQKGEESKKLIVVDFTASWCGPCRFIAPILAEIAKKTPEVIFLKVDVDELKTVAEEWSIEAMPTFLFLKEGKIVDKVVGAKKEELQLTIAKHAGATVAAT* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02656 119 SUPERFAMILY Thioredoxin-like 4 112 IPR036249 -
Rops9g02656 119 Gene3D Glutaredoxin 1 116 - -
Rops9g02656 119 CDD TRX_family 14 103 - -
Rops9g02656 119 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Rops9g02656 119 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Rops9g02656 119 FunFam Thioredoxin 6 113 - -
Rops9g02656 119 Pfam Thioredoxin 10 109 IPR013766 -
Rops9g02656 119 PANTHER THIOREDOXIN 7 110 - -
Rops9g02656 119 PRINTS Thioredoxin family signature 30 38 - -
Rops9g02656 119 PRINTS Thioredoxin family signature 77 88 - -
Rops9g02656 119 PRINTS Thioredoxin family signature 38 47 - -
Rops9g02656 119 NCBIfam thioredoxin 17 110 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02656 Rops-Chr9 49728865 49730244 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02656 9 49728865 49730244 Rops9g02656 9 49728865 49730244 ECH
Rops9g02656 9 49728865 49730244 Rops10g02416 10 42364714 42366900 PCT