Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02651 ATGCTCTCTCTGATTTCACCACCTTCATTTTGCTACATTCATTCACACAAAACTCGCTTCTTCTCCACTCTCTTACTTCCACCAAGGAGGAGCATCGAATTTCAACAACACAGAAAATGCAACTATGAGAATTATAAATGGAAAAGGGTAGAGTGCAGAGTTACGAGTCCTCCACCGTCAACGGCGTTAACGAAGGAACCTCACAAATACTTCGATCACGTGATTATCACCGTTCGTGGAGGAGACGGAGGTCACGGAGCGATACTGAACCAGAGGGTAAAAGAGGAAAAACTGGAGAAGGAGAAGGAGAAGAAGAACAAGAATGATAAGAATAAGAAGAAGGGGTCTTCTTTCAAGAGGGATTTTGATGGGTCACTTATACTCCCATTGGGTGGACATGGAGGTGATGTGGTAATTTATGCTGATGAGGGTAAAGACACGTTGTTGGAGTTTCATAACAAAAGTAGATATAATGCAAAACGTGGTGGGAATGTTGATGCAACGGGACTGAACTCATACTTGCGTGATGGACTTGCTGCCCCTACTCTCCGCATTCCTGTTCCCCTAGGTACAGTTGTGAAAAGTAAACGAGGGAAGATGTTGGCTGATCTAGCACAACCTGGTGATGAAGTTCTTGTTGCGAGAGGTGGACAAGGAGGGATTAGCCTGTTAGAAATGCCACAGCATAAAAGGAAAAAGATGATGGCTTTGACAACTAATGTGATGAGAGATGACTCTGATAAGGTTTTAGTTCACGGTCAACCTGGGGAGGAAGTTAAGTTGGAGTTGATCCTACGAGTTGTTGCTGATGTTGGTCTAATTGGACTTCCAAATGCTGGGAAATCAACGCTTCTGGCAGCCATTACACTTGCAAAACCTGATATTGCTGATTATCCTTTTACAACTCTAATGCCAAATCTTGGACGCCTTGGTGGTGATCCCAGCTTGGGGGCAGGGATGTATTCGTCTGAAGCTACATTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTGGGAAAGGGTCTTGGCCGCAATTTTTTGAGGCACCTAAGGAGGACCCGGCTATTGGTCCATGTTGTTGATGCAGCCACTGAGGACCCTATAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTTGAACGGCCATATGTTGTTATTTTGAATAAGATTGACCTACCAGGGGCGAAGGACAGGCTTCCATCATTGACTCGAGAAATTATGAGCATTGGCAATGATGGTGCAGCTTTGGAACCACAACCAAGCTCTGAAGTTTCGGCTCAATTATTGTCAGGTGAAAGTGACAGGAAGGAAAGAAAACTTGAGGACTATCCACGACCTCTCTCTGTTGTTGGAGTTAGTGTGCTAAAGGGTATCAGGATTAAAGAGATGTTAAAGGAGATAAGGGCGGCTTTAAGGAAGTGCTCAGATTCCAATGAACCATTGGCTTTGAATGTGCCACCATGA 1488 0.4456 MLSLISPPSFCYIHSHKTRFFSTLLLPPRRSIEFQQHRKCNYENYKWKRVECRVTSPPPSTALTKEPHKYFDHVIITVRGGDGGHGAILNQRVKEEKLEKEKEKKNKNDKNKKKGSSFKRDFDGSLILPLGGHGGDVVIYADEGKDTLLEFHNKSRYNAKRGGNVDATGLNSYLRDGLAAPTLRIPVPLGTVVKSKRGKMLADLAQPGDEVLVARGGQGGISLLEMPQHKRKKMMALTTNVMRDDSDKVLVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATEDPINDYRTVREELRMYNPEYLERPYVVILNKIDLPGAKDRLPSLTREIMSIGNDGAALEPQPSSEVSAQLLSGESDRKERKLEDYPRPLSVVGVSVLKGIRIKEMLKEIRAALRKCSDSNEPLALNVPP* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02651 495 Pfam GTP1/OBG 131 266 IPR006169 -
Rops9g02651 495 MobiDBLite consensus disorder prediction 86 117 - -
Rops9g02651 495 ProSiteProfiles Obg domain profile. 68 268 IPR006169 -
Rops9g02651 495 MobiDBLite consensus disorder prediction 89 117 - -
Rops9g02651 495 Coils Coil 88 113 - -
Rops9g02651 495 Gene3D GTP1/OBG domain 69 267 IPR036726 -
Rops9g02651 495 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 65 477 IPR045086 GO:0003924|GO:0005525
Rops9g02651 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 480 IPR027417 -
Rops9g02651 495 CDD Obg 269 407 IPR031167 GO:0005525
Rops9g02651 495 PRINTS GTP1/OBG GTP-binding protein family signature 327 342 IPR006073 GO:0005525
Rops9g02651 495 PRINTS GTP1/OBG GTP-binding protein family signature 271 291 IPR006073 GO:0005525
Rops9g02651 495 PRINTS GTP1/OBG GTP-binding protein family signature 292 310 IPR006073 GO:0005525
Rops9g02651 495 PRINTS GTP1/OBG GTP-binding protein family signature 344 362 IPR006073 GO:0005525
Rops9g02651 495 MobiDBLite consensus disorder prediction 420 448 - -
Rops9g02651 495 ProSitePatterns GTP1/OBG family signature. 329 342 IPR006074 GO:0005525
Rops9g02651 495 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 269 480 IPR031167 GO:0005525
Rops9g02651 495 Pfam 50S ribosome-binding GTPase 270 397 IPR006073 GO:0005525
Rops9g02651 495 Gene3D - 268 487 IPR027417 -
Rops9g02651 495 SUPERFAMILY Obg GTP-binding protein N-terminal domain 131 234 IPR036726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02651 Rops-Chr9 49685558 49691202 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02651 9 49685558 49691202 Rops9g02651 9 49685558 49691202 ECH