Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02642 ATGGCTGGTTTCTTCTCTCTAGGTGGAAGGGGAAGCCAACAAGACAAAGAAGAAGAAGAAGAAGAAAGAGAAGATAACAATAACAATAACACTAGTGGCCAATTCTTGTTCAGAAACGAAGAGATCTACAACAATAGGGGGTTTGAGATATGGCCACAGTCTTATCATCAACAACAGCAAAACCTGAACAACGTTAACTACTACTCCTTTGGGGTTGGTCCTAGTCGCAGGAACAACAACTCCTCGTCCTCCAACGTTAACGACGACGTTTCTGTCTCTTTCTCTGATGATTCTACGAGATTTGGATTCACTGTGATGAGGTCTGGAGGTTTAGGTGGTGGTGGCATGAACTGTCAGGACTGTGGGAACCAAGCCAAGAAAGATTGTCCTCATCTCAGATGCAGAACTTGTTGTAAGAGTCGAGGGTTTCAGTGCCAAACCCATGTTAAGAGTACTTGGGTTCCTGCAGCTAAACGCCGTGAACGACTACAACAACTTGCTGCGTTGCAACAACAAAATCAGCAACAATTTCGTGCAGCAGGAGCAGGAGCAGGAGGAGGAGATAATTCAAGACGACATAGAGAAAATCAAGGTGCTGGTTCTCTTGCTTGCGTTCCAGCACCTATTACCACCACAGGGTTGGAACTGGGACAATTCCCACCTGAACTAAACTCTCCAGCTGTGTTTCGGTGTGTAAAAGTTGGCCCAATGGATGTACAAGATGAGCGTTACGCGTATCAAACTGCTGTGAACATAGGAGGGCATGTTTTCAAGGGAATTCTCTATGATCAAGGTGCTGATAACCCTTACACGAGTGCAGCTGGTGAGGGTTCTTCAGGGGGTGGTGAAGCACAGCCACAAAGTCTCATAACAGCAACCACCACCACCACCACCGGAAACCTATTTGACTCTTCACTCTACCCGGCTCCACTGAATGCTTTCATGACTGGTACGCAATTCTTCCCACCCCCAAGATCCTAA 981 0.4669 MAGFFSLGGRGSQQDKEEEEEEREDNNNNNTSGQFLFRNEEIYNNRGFEIWPQSYHQQQQNLNNVNYYSFGVGPSRRNNNSSSSNVNDDVSVSFSDDSTRFGFTVMRSGGLGGGGMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERLQQLAALQQQNQQQFRAAGAGAGGGDNSRRHRENQGAGSLACVPAPITTTGLELGQFPPELNSPAVFRCVKVGPMDVQDERYAYQTAVNIGGHVFKGILYDQGADNPYTSAAGEGSSGGGEAQPQSLITATTTTTTGNLFDSSLYPAPLNAFMTGTQFFPPPRS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02642 326 NCBIfam LRP1 C-terminal domain 218 265 IPR006511 -
Rops9g02642 326 MobiDBLite consensus disorder prediction 1 36 - -
Rops9g02642 326 MobiDBLite consensus disorder prediction 177 199 - -
Rops9g02642 326 NCBIfam putative zinc finger domain, LRP1 type 117 159 IPR006510 -
Rops9g02642 326 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 310 IPR007818 GO:0003700|GO:0006355
Rops9g02642 326 Pfam Domain of unknown function (DUF702) 115 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02642 Rops-Chr9 49572315 49574181 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Rops9g02642 DUF702 3.9e-65 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02642 9 49572315 49574181 Rops10g02431 10 42540016 42541421 PCT