Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02638 ATGGAGGGAGAAGATGTTAGGTCTGGGACCAAGAAGAAGAGATCCAAACCTGTGGAAATTGGTTTTGATTCGGATGATGATGAACCCATTGGGTCTATTTTCAAGATGAGGAGGTCCAAGAAGAAGGTTAATTTGGCATCAGAAGGGTCTATTGGTGATGATTCTATTAGGAAGAATGAGGATTTGGGGGGTATGGATGATACCTTGGCTAGTTTCAGGAAGAGATTGAAGGGTCCTAAGAGAGATCAGGGATCTGAAGCAATTCCAGCTTTGAATGTTTCTCTTGAGGGTCATGATGTTGGTTTGGTTGATGGGGGATCTATGAGCATCTCAAAGGATGAAAAAGAGGTTGCTTTGTTGCTTGATGATGGCATGCAGATTCAGCATATGGAAGAAGAGGACTCCTTGTCTGCGATTCTCCATAAGGCACAATCTAATTCTATTAGGAAATCGCGCACATCTTCGAGTTCAAAGCAGAAAAGAGGGGTTCGGAATGTGGATAATGGGTTGAGTACTGGCTCCAAAAGTTTTCCTGAAACTGTAGATTCTGAGGTTGAAAGTAGATCTAGATCTTCTAAGAGGAATATCAAGTCTGCTCCGTTTTCTTCAGTATCTGCAATGGATAATCAAAAGGGTGGTGATGACAGTTTTCAAGAGGAATCCACCACGGGCACTAGCCATTCAAAAATTCCAGATGGACCATTAGTTGAAAACTCTAACTCGATCAACGTCGGTGATGGAGATAGGCAGCGATTGTCTTGTGTGCAAGTTGAAGATGTTGGTTGTGCTCCTGACCAAAAGATTGCATTGCAAGAAAGAATTCTCAATGATGGTTTAAATCAGTGCTCTTCCATGTTACAAGATGTTGAAATAATTGATACTGCCTCTCCCTCTAAATTGGGGGAAAGGGTATGTGGATCTACTGAGGCTGGAGAGTTTGAGAATAGATTGACTGATGAAAGAGCACAAGTGTGTAATGTTGCTTCAGCATGTGGTGTTTCTACTTCTATTGGGAAAGAAGTGTCCTCAACTTCTTGTCACACTGAGCCTTTGATTGAATCAACTGAAAATATATTGAATGAGAATAATTATATGGATTCTGGAAAGGTTTTCCAGGAATCCTCAATTAATGAAGGTATAAAATCAGAAACTGAGTTTATTTCTGGTAGAAATTGCTCTGATTATCACAGTTCAGATACAAATGCTAAAGTGCAAGGTTTTGTTGTTGGTCTTTTACCTGAAGAAAATGATCTAATTGCAAGTGGTAGTTTATCTTCTATAGTGCCTGATGAAGCCAATGAATCTGAATTGGCTCTCCAGCCAAATCTCGTGGAGAAACCTTTAGAAACATGTAATATTCTGGAATACTCTACCGCTTCGATTCTGAAATGCAGCCCGGTGTTAGATCCTGTTCAATATGATGGATACTCTATTCAGTCTTCAATTCCAGATGAAAATGGAAATACTGCAGAATATCATGCCTCTGTGTCTGATTTTGCTGACAATGACGGTAAGATATCAGCCAGTCCTCGTGTGACACGAAAGGCCAAAATGCGTAAGCATGGAGACATGACTTATGAGGGGGATGCTGATTGGGAGATTTTAATAAATGATAAAGCTCTAAATGAAAGCCAAGTTGTTGTAGATGGTGAACGCACTCTTAGAACAAGAGTGAAGCATGATACCTCTTTGAATGCTGTTGAAGACTCTGAAAATGTTGCAGTAGTAGCAGTATCTGCTGGGCTGAAAGCCCATGCAGTTGGTCCAATAGAGAAAATAAAATTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTTAAGGAATATTTGGATTGCAGGAATCAAATCTTAAGTCTTTGGAGCAGAGATGTCACACGTATTTTGCCTCTAGCTGAATGTGGAGTTGGTGATACTCATTCTGAGAATGAAAGTCCTCGGTCTTCTCTTATTAGGGAGGTCTATGCATTTCTCGATCAATGTGGTTATATAAATGTTGGAATTGCCTCTCAGAAGGAGAATATTGGAAGTAATGCAAGACAGTGTTATAAAGTTGTAAAAGAAAAAGGTTTTGAGGGAAGTTCCACAGCTTCACTGGCTGACTCCGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTAAAATGTCAGATGCTTCCATGGAGATTAATGATGGTCTAACAAAGGATTATGAAGACCTGAAAACTGAAGCTACAGAAGGCACGAGTCATGCTAATGAAGCGATGATGGATTTATCAAACATGACACAACATGAAGAAAGAAACAATTACCAGGAAAATGTTGGAATTCAGGATGGAGTTAGTGGAACTATACATGTCAATATTAACAGTTCTGTTCCTTCTTCCAATTTTCCTGATTGCAGATTGACTTCTCTTGTGGCTACAGAGCAAAGCAATGGATCAACCTGTGTTAAATCTGCCTTAGGTGATCAGATAGGTTATCCTCTGCAGTCTGATTTGGAGGCTAGAAAGAGAGTGATTGTCATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGCCACTTGCAACGTCAGGGATTTCTTGTAACTGTACTTGAGGCTAGGAATAGGATAGGAGGTCGTGTATTTACAGATCACTCATCTCTCTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACTGGTGTCGAGGCTGATGTGGCCACCGAGAGAAGACCAGATCCTTCCTCGTTGGTTTGTGCTCAGCTGGGCCTTGAGTTGACTGTGTTAAACAGTGACTGCCCTCTTTATGACATAGTGACAGGAAAAAAAGTTCCTGCAGATATGGATGAGGCATTGGAAGCTGAATACAATAGTCTTCTTGATGACATGGAACTGGTTGTTGCTCAGAAAGGTGAACAAGCAATGGGAATGTCTCTTGAAGACGGTTTAGAATATGCCCTTAAGATTCGCCGTATGGGACGCTCTGAAAGTAGTGAAGAAACTAAACAAAATAATAATGCAGATAGTGCATTTGATTCCGAAAAGGAGGATGCCATGGAACAAAAATCTAATGAGGACATTTTGAGTCCTCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTTGCTAAAGGAAGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGATTTGGGGGAGCTCATTGTATGATCAAAGGAGGTTACAGCACTGCTGTTGAGTCTCTAGGAGAAGGGCTTGCTATTCACTTGAACCATGTTGTAACAGATGTGTCATATGGTATCAAGGAACCTGGCCAGAATCATAAAGTCAAAATCTCTACATTGAATGGCAATGAGTTCTTTGGTGATGTTGTCCTCATTACTGTCCCGCTTGGCTGTTTGAAGGCTGAAAGTATACAATTCTCCCCCCCTTTGCCAGAGTGGAAATGTTCTTCCATTCAGCGTCTTGGTTTTGGAGTTCTCAATAAAGTGATTTTGGAATTTCCTACTGTGTTTTGGGATGATGCTGTGGACTACTTTGGAGCAACAGCTGAGGAGAGAAGCAGAAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTGGGGGCTCCTGTCCTTATATCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAAAGTTTAAGCTCTTCTGATCATGTCAACCATGCACTGAAGGTTCTCCGTAAACTTTTTGGGGAGGCTTCAGTTCCTGATCCTGTTGCATATGTTGTGACTGATTGGGGTAGGGATCCTTATAGCTATGGTGCTTACTCTTATGTTGCTGTTGGAGCATCAGGAAAAGACTATGATATAATAGGGAGGCCAGTTGATAATTGCTTGTTTTTTGCCGGTGAAGCAACCTGCAAAGAGCACCCTGATACTGTTGGTGGTGCAATGATGAGTGGACTTCGGGAGGCTGTTCGCATAATTGACATATTGAACACAGGAGATGATCATACTGCAGAGGTGGAGGCATTGGAAGCTGCATGGGAACAGTTAGATACTGAAAGGGATGAAGTTAAAGACATAATAAAGAGACTTAATGCGGTCGAGCTTTCTAACATATGGTACAAGAATGCTTTAGATGGCGCTCAAATCTTAACCCGGGAAGCTTTATTAAGGGAAATGTTCTTCAATACGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAACAATTGCTAAGTCTTCCTGTTGGAAACTTGAAGTCCTTTGCTGGAAGTAAAGAGGGGCTAACAGTTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCCTGAGGCACTGTTTGCGTCTTCTTGTGCGTGTGTCTACTGATCTAGTTGCTGTACGCTTATCAGGAATGGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTGGTCAGTGTATGGCTTGAAGTTTTCCGTAAGGAAAAAGCTTCTAATGGGGGGTTAAAGTTGTCGCGACAAGCAACTACTGTAGATTTATCAAAGAGAAAATATGGAAAAGATTCAGCCTCAGGAAAGCCTCCTCTGAGCACACATCAGGGTACCATTGAAAATAAAGGAGGCTTGCCGAATCCTGTATCTGCTGGAAGCAATTCACCTTCCACCACACATGTAAAGAAATTGCACAGCAAACAAGGAAGACAACTGGCAGCATCTGACTCGAGGCATGAGGTCAGTTCTTCCAGGTCCCAAGGTTCAATAGACAGAGCAGTTACTGAGAAGGAAGATAACCGCTATACTATGTCTGAAGAAGAACAGGCTGCTATAGCAGCTGCAGAAGCTGCCCGTGCTAAAGCACTTGCCGCCGCTGAGGCATATGCCTCTGCTGAAGCCAGGTGCAATACATTGTTACAACTTCCGAAGATCCCCTCATTCCACAAATTTGCTAGACGGGAGCAGTATTCACAAAATGATGAGTGTGATAGTAGAAAAAAGTGGTCTGGCAGTGCTCTCGGAAGGCAAGATTGTATTTCGGAGATTGATTCTAGGAATTGCAGAGTTAGGGACTGGTCTGTCGATTTCTCTGCTGCTTGTGTTAACCTTGATAATTCCAGAATGCCAGTTGATAACATCTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGTGGACAGTAATATATACACAAAAGCTTGGATTGACACATCTGGTGGTGTGGTAATAAAAGACCATCATGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCTAATCCATCCATTCATTTGAAGGATGAGGAGGATTCAAATGCCTGTTCAAGGTTACCCAGCTGGAAGCGTGATGGTATGGCAAATGAGAGCTCTATTTCGCAGGTTACTGTAAATAAGGAGACCGTGAAAAGTCATTCTCGAGGAGCAGATCATATTAAACAGGCTGTTGTCGACTATGTTGCATCACTACTTATGCCCCTTTATAAGGCAAGGAAATTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCATGGAGCAAGCAACAGATGCAGAAAAGGCCATGACTGTTCACGAGTTTCTAGATTTTAAGCGAAAAAATAAGATTCGCTCCTTTGTGGATATATTAATTGAGAGACACATGGCAACAAAATCAGATGTGAAATCTTAG 5697 0.4209 MEGEDVRSGTKKKRSKPVEIGFDSDDDEPIGSIFKMRRSKKKVNLASEGSIGDDSIRKNEDLGGMDDTLASFRKRLKGPKRDQGSEAIPALNVSLEGHDVGLVDGGSMSISKDEKEVALLLDDGMQIQHMEEEDSLSAILHKAQSNSIRKSRTSSSSKQKRGVRNVDNGLSTGSKSFPETVDSEVESRSRSSKRNIKSAPFSSVSAMDNQKGGDDSFQEESTTGTSHSKIPDGPLVENSNSINVGDGDRQRLSCVQVEDVGCAPDQKIALQERILNDGLNQCSSMLQDVEIIDTASPSKLGERVCGSTEAGEFENRLTDERAQVCNVASACGVSTSIGKEVSSTSCHTEPLIESTENILNENNYMDSGKVFQESSINEGIKSETEFISGRNCSDYHSSDTNAKVQGFVVGLLPEENDLIASGSLSSIVPDEANESELALQPNLVEKPLETCNILEYSTASILKCSPVLDPVQYDGYSIQSSIPDENGNTAEYHASVSDFADNDGKISASPRVTRKAKMRKHGDMTYEGDADWEILINDKALNESQVVVDGERTLRTRVKHDTSLNAVEDSENVAVVAVSAGLKAHAVGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSRDVTRILPLAECGVGDTHSENESPRSSLIREVYAFLDQCGYINVGIASQKENIGSNARQCYKVVKEKGFEGSSTASLADSEDGVSFIVGQTKMSDASMEINDGLTKDYEDLKTEATEGTSHANEAMMDLSNMTQHEERNNYQENVGIQDGVSGTIHVNINSSVPSSNFPDCRLTSLVATEQSNGSTCVKSALGDQIGYPLQSDLEARKRVIVIGAGPAGLTAARHLQRQGFLVTVLEARNRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLYDIVTGKKVPADMDEALEAEYNSLLDDMELVVAQKGEQAMGMSLEDGLEYALKIRRMGRSESSEETKQNNNADSAFDSEKEDAMEQKSNEDILSPQERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSTAVESLGEGLAIHLNHVVTDVSYGIKEPGQNHKVKISTLNGNEFFGDVVLITVPLGCLKAESIQFSPPLPEWKCSSIQRLGFGVLNKVILEFPTVFWDDAVDYFGATAEERSRRGHCFMFWNVRKTVGAPVLISLVVGKAAIDGQSLSSSDHVNHALKVLRKLFGEASVPDPVAYVVTDWGRDPYSYGAYSYVAVGASGKDYDIIGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGDDHTAEVEALEAAWEQLDTERDEVKDIIKRLNAVELSNIWYKNALDGAQILTREALLREMFFNTKTNAGRLHVAKQLLSLPVGNLKSFAGSKEGLTVLNSWILDSMGKDGTQLLRHCLRLLVRVSTDLVAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRKEKASNGGLKLSRQATTVDLSKRKYGKDSASGKPPLSTHQGTIENKGGLPNPVSAGSNSPSTTHVKKLHSKQGRQLAASDSRHEVSSSRSQGSIDRAVTEKEDNRYTMSEEEQAAIAAAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARREQYSQNDECDSRKKWSGSALGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNISQRSHSNEIASHLNFREHSGESVAVDSNIYTKAWIDTSGGVVIKDHHAIERWQSQAAAADSYFSNPSIHLKDEEDSNACSRLPSWKRDGMANESSISQVTVNKETVKSHSRGADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMTVHEFLDFKRKNKIRSFVDILIERHMATKSDVKS* 1899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02638 1898 Gene3D - 936 1263 - -
Rops9g02638 1898 SUPERFAMILY FAD-linked reductases, C-terminal domain 1146 1257 - -
Rops9g02638 1898 MobiDBLite consensus disorder prediction 1577 1591 - -
Rops9g02638 1898 MobiDBLite consensus disorder prediction 994 1013 - -
Rops9g02638 1898 PANTHER FLAVIN MONOAMINE OXIDASE 828 1314 - -
Rops9g02638 1898 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1406 1490 IPR035441 -
Rops9g02638 1898 MobiDBLite consensus disorder prediction 143 180 - -
Rops9g02638 1898 PRINTS Adrenodoxin reductase family signature 829 851 - -
Rops9g02638 1898 PRINTS Adrenodoxin reductase family signature 852 865 - -
Rops9g02638 1898 Pfam SWIRM domain 583 663 IPR007526 GO:0005515
Rops9g02638 1898 MobiDBLite consensus disorder prediction 143 243 - -
Rops9g02638 1898 SUPERFAMILY FAD/NAD(P)-binding domain 827 1311 IPR036188 -
Rops9g02638 1898 MobiDBLite consensus disorder prediction 1515 1548 - -
Rops9g02638 1898 MobiDBLite consensus disorder prediction 979 1013 - -
Rops9g02638 1898 ProSiteProfiles SWIRM domain profile. 573 673 IPR007526 GO:0005515
Rops9g02638 1898 MobiDBLite consensus disorder prediction 194 243 - -
Rops9g02638 1898 MobiDBLite consensus disorder prediction 1503 1591 - -
Rops9g02638 1898 Pfam Flavin containing amine oxidoreductase 838 1308 IPR002937 GO:0016491
Rops9g02638 1898 MobiDBLite consensus disorder prediction 44 64 - -
Rops9g02638 1898 FunFam Lysine-specific histone demethylase 1A 572 676 - -
Rops9g02638 1898 Gene3D - 572 677 IPR036388 -
Rops9g02638 1898 MobiDBLite consensus disorder prediction 1 31 - -
Rops9g02638 1898 MobiDBLite consensus disorder prediction 1561 1576 - -
Rops9g02638 1898 Gene3D - 830 1306 IPR036188 -
Rops9g02638 1898 SUPERFAMILY Homeodomain-like 571 668 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02638 Rops-Chr9 49470439 49487367 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Rops9g02638 Amino_oxidase 2.3e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02638 9 49470439 49487367 Rops9g02638 9 49470439 49487367 ECH