Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02637 ATGACAATGATCACTTCAATTCTCTTCCTCCTTCCAATTCTCGTGGCCACCGTGACGGTGGTTAACGCCGGCAAGGGAGAATGGAAGCTTCTGCAGAAAAGCATAGGCATTGTAGCCATGCACATGCAGCTTATGCAAAACGATCGCGTTGTGATCTACGACCGCACAGACTTTGGTTTCTCCAACCTCTCTTTACCTCACGGAAGGTGCCGCCACGACCCGAAGGAAAGGAAGGTTAAAATCGACTGCACCGCACACTCCGTTGAATACGACGTCGTATCCAACACTTTCCGTGCATTGTTCATCCAAACCAACGTTTGGTGTTCCTCCGGTTCGGTGGCTCCCGACGGAACCCTAATCCAAACCGGTGGCTTCAATGACGGAGAACGTACGGTCAGAACCTACAGTCCCTGCCCCGCCTGTGACTGGCGAGAATTTGATGGCGCACTCGCCGCCCGGAGATGGTACTCCACCAATCACAAGCTGCCGGACGGGCAGCAAATAGTGATCGGTGGCAGAAGACAATTCAACTATGAGTTTTACCCCAAAACCAATGCCAATGCTAAAAACTTCTACAGTTTACCGTTTTTGGTTCAAACCCATGACCCTGGTGAGGAGAACAATTTGTACCCTTTTGTTTTTCTCAATGTTGATGGCAACCTCTTCATCTTTGCCAATGACAGAGCTATCTTGTTCGATTATACTAAGAACGTTGTCGTGAGAACATTCCCGAATGTTCCAGGTGGGGATCCGAGGTGTTATCCTAGTACCGGTTCTGCTGTTTTGTTACCGTTGAAGAATCTAGAAGCGAAGGTTTTAGAAGCTGAGGTTTTGGTGTGTGGTGGAGCTAAAAGAGGGTCTTATAAACGTGCCATCAAGGGTGAGTTTCTCAGAGCTTTGAATACATGTGCTCGGATCAAAATAACCGACCCGAAAGCAAATTGGGTCGTGGAGACAATGCCCGGGGCTAGGGTCATGAGTGACATGGTGATGCTTCCAAACGGCAACGTTTTGATCATAAATGGAGCAGCTTCGGGTACGGCGGGTTATGAAACCGGGAGGAACCCGGTTTTAAACCCGGTTATTTATAAAACGGATAGTCCAATCAGGTCGAGATTCGAATTGCAAAACCCGTCTAGCATACCAAGGATGTACCATTCCACTGCCGTTTTGCTTCGTGATGGGAGGGTCCTAGTTGCGGGTAGTAATCCTCATGTTGGTTACAATTTCACCACTCCGTTGTTCCCAACGGAGCTTAGTGTGGAAGCGTTTTCTCCTTCTTATTTGGAACCTGGGTTCTCAAACGTGCGTCCTAGAATTGTGTCACCTGCTTCTCAAACCAAACTCAAGTATGGTCAGAAGTTGAATGTGAAAGCAGCTATATTGGTTCAGGATTTGGCGTCAGTGTCGGTGACAATGTTGGCACCACCTTTTAATACACATTCAATCTCCATGAATCAGAGGTTGTTGGTGTTGAATCCGAGCAAAGTGACAAATGTGGGAAGATCCATATGTGAAATTGAGGTTACCATGCCTGGTTCACCTATTATTGCACCACCCGGTTTTTATCTTCTATTTGTGGTCCATAAAGAAATTCCTAGTGAGGGTATTTGGATCCAGATGCTTTGA 1629 0.4721 MTMITSILFLLPILVATVTVVNAGKGEWKLLQKSIGIVAMHMQLMQNDRVVIYDRTDFGFSNLSLPHGRCRHDPKERKVKIDCTAHSVEYDVVSNTFRALFIQTNVWCSSGSVAPDGTLIQTGGFNDGERTVRTYSPCPACDWREFDGALAARRWYSTNHKLPDGQQIVIGGRRQFNYEFYPKTNANAKNFYSLPFLVQTHDPGEENNLYPFVFLNVDGNLFIFANDRAILFDYTKNVVVRTFPNVPGGDPRCYPSTGSAVLLPLKNLEAKVLEAEVLVCGGAKRGSYKRAIKGEFLRALNTCARIKITDPKANWVVETMPGARVMSDMVMLPNGNVLIINGAASGTAGYETGRNPVLNPVIYKTDSPIRSRFELQNPSSIPRMYHSTAVLLRDGRVLVAGSNPHVGYNFTTPLFPTELSVEAFSPSYLEPGFSNVRPRIVSPASQTKLKYGQKLNVKAAILVQDLASVSVTMLAPPFNTHSISMNQRLLVLNPSKVTNVGRSICEIEVTMPGSPIIAPPGFYLLFVVHKEIPSEGIWIQML* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02637 542 CDD E_set_GO_C 432 541 IPR015202 -
Rops9g02637 542 Pfam Glyoxal oxidase N-terminus 40 282 IPR009880 -
Rops9g02637 542 PANTHER SECRETED PROTEIN-RELATED 9 541 - -
Rops9g02637 542 Gene3D Immunoglobulins 436 542 IPR013783 -
Rops9g02637 542 Pfam Galactose oxidase-like, Early set domain 437 540 IPR015202 -
Rops9g02637 542 SUPERFAMILY Galactose oxidase, central domain 89 430 IPR011043 -
Rops9g02637 542 FunFam Aldehyde oxidase GLOX 22 435 - -
Rops9g02637 542 SUPERFAMILY E set domains 433 540 IPR014756 -
Rops9g02637 542 Gene3D - 22 432 IPR037293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02637 Rops-Chr9 49450157 49451785 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02637 9 49450157 49451785 Rops9g02637 9 49450157 49451785 ECH
Rops9g02637 9 49450157 49451785 Rops10g02444 10 42775094 42777007 PCT