Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02624 ATGGACCGCCGCTGGCCTTGGAAGAAAAAATCATCTGACAAGGCTGTGCTTGAGAAAGCAGCGGCTGAATTGGACTCTGCTGGTGCTGCCACTCAGGGCAATCAGGATGTTTACAAGAAGCCGAACTACGTCCAAATCTCTGTAGAGGCGTATTCACGTCTGACTGGTCTGGAGGATCAAGTAAAGACATATGAAGAAAAAGTTCAGACGCTGGAGGATGAGATCAAGGAATTAAATGAAAAACTGTCAGCAGCAAACTCAGAGATAAATACTAAGGAAGGCTTGGTAAAACAACATGCTAAAGTAGCTGAAGAGGCTGTCTCAGGCTGGGAAAAGGCAGAAGCAGAAGCTTTGGCATTGAAGAACCATTTGGAATCTGTCACTCTTGCAAAACTCACTGCTGAGGACCAAGCATCACAGTTAGATGGTGCCCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACATGAACAGAAAATACAGGAAATTGCTCTCACAAAAACCAAACAATTGGACAAGATTAAGGGTGAACTTGAGGCTAAGATAGCGAGCTTTGAACAGGAACTCCTCATGTCTGCTGCTGAGAATGCGGCTCTGTCAAGGTCCTTGCAGGAGCGCTCTAACATGCTAATCAAAATAAGTGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATAGAATCATGTGAAAGAGAGATCAATTCACTTAAATATGAGCTTCATGTTATTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCTGAAGCTGCTAACAAGCAGCATATGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCGGAGTGCCAAAGGTTACGTGGTCTAGTACGGAAGAAATTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTAGAAGTTGAAAATCTTGGCCGAGATTTTGGAGAAACTCGATTAAGGAAGTCTCCTGTCAAACCTGCTAGTTCTCATCTGTCCCAATTGCCCGAGTTCTCCCTTGAGAATGTACAGAAATTCCAGAAAGATAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAACGGTGAATTGCAGGCTTCAAGGAGCATGTGTGGTAAAACACTAGGCAGACTTCAAATGTTGGAAGCACAAGTTCAGACAAGTAATCAGCAGAAGGGATCTCCAAAATCCATCATCCATAGAAACCATGAAAGCATTTACAGTCAAAATGCAAGCAATGCACCAAGCTTGATCTCCATGTCTGAAGATGGAAATGACGATGTGGGAAGTGTTGCTGAGTCTTGGTCTCCATCAATGATCTCTGAGCTATCTCCTTTCCCAAAAGAAAAGAATACTGAGGAATTGAGCAAATCCGAAGCCACTAAGAAGTTGGAACTAATGGATGACTTTTTGGAGGTGGAGAAGTTGGCTCGATTATCAAATGATTCTAATGGAGATGCCTCTGTTTCATTTACTTCAAACAATAAGACGAATGAAATTGTGACCAATGTTGTATCAGAAGTCAGTACCAGCAAAGATGATCCCTCCGAGACCAAAAAAAAAAGTGATTCGAATCTGTTGCCAAATCAAGTGTCATCTGCCGCGGTATCATCAGTACCTGATCCCCAAGCTGATATTGATAGCTTGTCGTTAGCAGAACTTCCATCAAGAATATTATCAGTTTTTGAGTCCATGGATAAGGATGCTGATATAGGGAAGATCCTGAAGGATATCAAACACGTTCTTGAAAATGCACATGACACTTCTATCCAGGACTCTGTGGCTGTCATTCCCTGCGAAGTGAAGTCTTCTGATAGTACATGCGATAAGCAGGGTAATCCTGAAGATGCTGGCTTAACTTCAGAAAAAGAACTCATTCCATCCCAGAAACCTACAGAATACATGCAGATAACTTCAGATTTAGAAGCTGCAATTTCTCAGATTCGTGACTTTGTATTGTTCCTAGGGAGAGAAGCAATGGCAGTTCATGACATATCTTCTGATGGAGATGGAATAAGCCAAAAGATGGAGGAGCTTTCTATCACCTATAATAAAGTTATAAGCAATGAAGCAAGTTTGCAACAGTTTGTTCTTGATCTATCTTATGTTTTAGCTAAAGCGAGTGAATTCAGATTTAATATCCTTGGTTATAAGGGTATGGAAACTGAAACGAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCTGAAAATAAGTTAGTTCAAGACAATTCATCAGGAGAGAGATATCAAAATGGTCATTCCCATATTCTCAATCCCTGTTCTGATCCTGAGGTTCCTGATGATGGAAATTTGACCTCAGGCTATGAATCAAATGCCACATCACAAAAGTTCTCGATGGAGGACTTTGAAGAGTTGAGATTAGAGAAAGAGAAGGCAGTTGAGGATCTGTCAAAATGTGCTGAAAATCTTGACATGACGAAGTCTCAGTTACTAGAGACTGAGCAACTTCTAGCAGAAGTTAAATCACAATTGGCTTCTGCTCAAAGATCAAACAGCTTGGCTGAGACTCAACTAAAATGCATGGCAGAGTCATACAGGTCACTTGAAACACGTGCACAGGAGTTTGAAACCGAGCTTAATCATCTGAGAATAAAGACAGAAACTCTGGAGAATGAACTTAAAGATGAAAAGAGGGCTCATGAAGAAGCTTTGGCAAAGTACAAGGAGCTAGAAGAACAATTGCAAAGGAATGAGAGCTCGGCTGCTGATAATGACCTTAAGACTAAGCAGGAGAGAGACTTGGCAGCTGCTGCTGAAAAGCTAGATGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGTTGAAAGCTCTGCATCCTCAAACAGAGACAATGGGATCTCCATACAGGGAGAGGATTTCAAAGGTTGAAAGCTTCACGGAGCGTGAACCTACTGCTAGCAGCCCAAATTTGCAGGAGTTGGATCAGGTGGAGATGGACGGTGCAGCTTCTCCTATTGTGCAAAGATTGGGTGCAGAGTCCCCCTTGCATTTTTCTAACAGTTTATATAGTCCAGATCATGAGTCAAACTTTAAAGCCGTGTCTCCTGTACAGCATACAAACCACAGGCCTGCAAAGTCAACCTCTTCAACAGCTTCTTCAACTCCTACACCCGAGAAACACGCTCGAGGTTTTAGCAGGTTCTTTTCATCAAAAGGAAAAGCCAGTCATTGA 3258 0.4187 MDRRWPWKKKSSDKAVLEKAAAELDSAGAATQGNQDVYKKPNYVQISVEAYSRLTGLEDQVKTYEEKVQTLEDEIKELNEKLSAANSEINTKEGLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLAKLTAEDQASQLDGALKECMRQIRNLKEEHEQKIQEIALTKTKQLDKIKGELEAKIASFEQELLMSAAENAALSRSLQERSNMLIKISEEKAHAEAEIELLKGNIESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDFGETRLRKSPVKPASSHLSQLPEFSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNGELQASRSMCGKTLGRLQMLEAQVQTSNQQKGSPKSIIHRNHESIYSQNASNAPSLISMSEDGNDDVGSVAESWSPSMISELSPFPKEKNTEELSKSEATKKLELMDDFLEVEKLARLSNDSNGDASVSFTSNNKTNEIVTNVVSEVSTSKDDPSETKKKSDSNLLPNQVSSAAVSSVPDPQADIDSLSLAELPSRILSVFESMDKDADIGKILKDIKHVLENAHDTSIQDSVAVIPCEVKSSDSTCDKQGNPEDAGLTSEKELIPSQKPTEYMQITSDLEAAISQIRDFVLFLGREAMAVHDISSDGDGISQKMEELSITYNKVISNEASLQQFVLDLSYVLAKASEFRFNILGYKGMETETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHILNPCSDPEVPDDGNLTSGYESNATSQKFSMEDFEELRLEKEKAVEDLSKCAENLDMTKSQLLETEQLLAEVKSQLASAQRSNSLAETQLKCMAESYRSLETRAQEFETELNHLRIKTETLENELKDEKRAHEEALAKYKELEEQLQRNESSAADNDLKTKQERDLAAAAEKLDECQETIYLLGKQLKALHPQTETMGSPYRERISKVESFTEREPTASSPNLQELDQVEMDGAASPIVQRLGAESPLHFSNSLYSPDHESNFKAVSPVQHTNHRPAKSTSSTASSTPTPEKHARGFSRFFSSKGKASH* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02624 1085 Coils Coil 213 289 - -
Rops9g02624 1085 MobiDBLite consensus disorder prediction 523 563 - -
Rops9g02624 1085 MobiDBLite consensus disorder prediction 1022 1068 - -
Rops9g02624 1085 Coils Coil 138 191 - -
Rops9g02624 1085 Coils Coil 54 95 - -
Rops9g02624 1085 Coils Coil 349 376 - -
Rops9g02624 1085 Coils Coil 935 955 - -
Rops9g02624 1085 MobiDBLite consensus disorder prediction 985 1085 - -
Rops9g02624 1085 SUPERFAMILY Tropomyosin 810 987 - -
Rops9g02624 1085 Coils Coil 810 928 - -
Rops9g02624 1085 MobiDBLite consensus disorder prediction 431 451 - -
Rops9g02624 1085 MobiDBLite consensus disorder prediction 988 1002 - -
Rops9g02624 1085 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1080 - -
Rops9g02624 1085 MobiDBLite consensus disorder prediction 542 559 - -
Rops9g02624 1085 Pfam Filament-like plant protein, long coiled-coil 92 973 IPR008587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02624 Rops-Chr9 49160331 49166166 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02624 9 49160331 49166166 Rops9g02624 9 49160331 49166166 ECH
Rops9g02624 9 49160331 49166166 Rops10g02456 10 42938268 42944005 PCT