Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02617 ATGGCTCTCTTAACTTTCTTGCCTGAACAATCTGACCCCAAAAAACAACACCCCAAACGCAAGAGAAAGAAGAAGCAGCAGCAGCAGCAGCAGCAGAAGCAGAAGCAGAAACCACCCTCTTCATGGGACCAAATCAAGAACATCATAACCTGCAAACAGATAGAAGGTTCTAGAGTGCATGACCCCTCAAAAGTAGGTGGTGGATATTCCAAGCTAGGTTCTTCTTGCAGCTCTATATGTAGCTTCAGAGATGTTGTTCATGGGAGCACTAGAGTTGTTCATAGGTCTGATAACTCTTCCCCAGAGAGTAGCACCCTGGGTCAGGAAACTGGTTTACTCAGTAGAAAACCATCAACTCGTTCTGCATCAGCTTCTGGGAAATCCAACGGTGGAGCAACCTACACGTCATCATCTTCCAGAGGAATGCAATTCAGGAAGTTGTCTGGGTGTTATGAATGTCACATGATCATTGACCCTACTAGGCTACCAATTCCAAGGAGCACTATATGTACTTGCTCTCAATGTGGTGAAGTCTTCCCGAAGATGGAAAGCTTGGAGCTTCATCAAGCTGTTCGTCATGCTGTTTCGGAGCTGGGTCCGGAGGATTCGGGTCGGAACATAGTGGAGATAATATTCAAATCAAGTTGGATGAAGAAGGACAGCCCAATGTGCAAGATCGAACGAATATTAAAAGTGCACAACACCCAACGCACGATCCAACGGTTCGAGGAGTGCAGGGACACTGTAAAGTCCCGTGCAGTGAACAGCACCAAGAAGAACCCAAGGTGCGCAGCTGATGGTAACGAACTCCTACGGTTCCACTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGATCCACCGCCTTGTGCGCCACCGTACCTGGCTGCGGAGTTTGCACCATCATAAGGCACGGTTTTCAAGGTAAGAGCAAAGGGGTTAGGACCACTGCTAGTAGTGGTAGGGCCCACGATTCGGTTCAATGTGGCGAAGGTTCTAGAAGGGCAATGTTGGTGTGCCGTGTGATTGCTGGGAGGGTGAAGCGCGTGGCGGAGGAGCCGTCGCCGTCGCCGTCGGAGGAGGTGGAACCTATGTCCTATGATTCTGTAGCAGGCTACACAGGAATCTACTCGAATCTCGAAGAGTTGGTTGTTTTCAACCCTAGGGCTATCCTTCCTTGTTTCGTAGTCATTTACAAGGTGCTATAA 1209 0.4946 MALLTFLPEQSDPKKQHPKRKRKKKQQQQQQQKQKQKPPSSWDQIKNIITCKQIEGSRVHDPSKVGGGYSKLGSSCSSICSFRDVVHGSTRVVHRSDNSSPESSTLGQETGLLSRKPSTRSASASGKSNGGATYTSSSSRGMQFRKLSGCYECHMIIDPTRLPIPRSTICTCSQCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWMKKDSPMCKIERILKVHNTQRTIQRFEECRDTVKSRAVNSTKKNPRCAADGNELLRFHCTTLTCALGARGSTALCATVPGCGVCTIIRHGFQGKSKGVRTTASSGRAHDSVQCGEGSRRAMLVCRVIAGRVKRVAEEPSPSPSEEVEPMSYDSVAGYTGIYSNLEELVVFNPRAILPCFVVIYKVL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02617 402 FunFam C2H2-like zinc finger protein 194 400 - -
Rops9g02617 402 SUPERFAMILY ADP-ribosylation 195 400 - -
Rops9g02617 402 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 40 399 - -
Rops9g02617 402 Gene3D - 194 401 - -
Rops9g02617 402 MobiDBLite consensus disorder prediction 31 45 - -
Rops9g02617 402 ProSiteProfiles Zinc finger C2H2 type domain profile. 170 198 IPR013087 -
Rops9g02617 402 MobiDBLite consensus disorder prediction 1 45 - -
Rops9g02617 402 MobiDBLite consensus disorder prediction 16 30 - -
Rops9g02617 402 ProSitePatterns Zinc finger C2H2 type domain signature. 170 193 IPR013087 -
Rops9g02617 402 MobiDBLite consensus disorder prediction 92 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02617 Rops-Chr9 48992529 48995480 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops9g02617 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02617 9 48992529 48995480 Rops9g02617 9 48992529 48995480 ECH