Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02616 ATGTCTGTTGTTTCTGTTACTGTTCCTGCCACCGTGGGATCGTTTCCTTCACGATCCCGGCTGCGGCGGTTGACGGCGGCCCTCCGATCTGACACTGTGTCAGTTGGTCCAACCAGAATATTAACCAAACTGAAACAAGAGTGTGCTACTCCTCTGCCTCTTCTTCAGCAAGTGGCTCACACCATGACTTCTGAAATGCGAGCTGGGCTTGCTGGTGGGCCTGGGCTTCCCATGATACCCACCTTTGTTGAAAATCTTCCCACTGGGAATGAGAAAGGGTTGTTTTATGCTTTGGATCTTGGTGGAACAAACTTCCGTGTTTTGAGGGTGCAATTGGGTGGCAAAGATGAGCGTGTCATTGCCACTGAGTTTGACCAAGTTTCCATACCTCAGGAACTCATGTTTGGTACATCCGAGGAGCTGTTTGACTTCATTGCTTTGGCGCTAGCAAATTTTGTGGCCAAGGAGGATGGTAGATTTCATTTCTTAAAGGGAAGAAAGAGAGAAATTGGGTTTGCGTTTTCATTTCCTGTGAAGCAGACATCTATTGATTCTGGCATACTAATTAAGTGGACCAAGGGTTTTGCAGTCTCTGGAACAGCAGGAAGAGATGTGGTTGCTTGTCTGAATGAGGCTATGGAAAGGCAAGGACTAGATATGCGAGTTTCTGCTCTGGTAAATGATGCTGTGGGAACATTAGCTGGAGCAGAATACTGGGACAATGATGTCATGGTTGCTGTCATTTTGGGTACTGGAACCAATGCTTGCTATGTTGAACAAATCAGTGCCATTCCCAAGTTACAGGGTCATGTCTCTTCTTCTGGGAAAATGATTATTAATACTGAGTGGGGATCTTTCTCAAATGGTCTCCCTTTAACTGAGTTTGATAGAGAAATGGATGCTGATAGCATCAATCCTGGTCAGCAGATCTTTGAAAAGACAATCTCAGGAATGTATCTAGGCGAAATTGTGAGACGAGTGCTACTGAAAATGGCTGAAGAGGATGGTTTGTTTGGAAAATCTGTCCCACAAAAACTATCAATGCCTTTCATTCTCGGGACCCCAGATCTATGTGCCATGCAGCAGGACAATTCTGGGGATTTACAAGCTGTTGGGTCCCTCCTCTATGATAAAGCAGGGGTTGAACCCAAGTTAAGTGAAAGAAGAACAGTGTTAGAGGTTTGTGACGCTATTGTGAAGCGTGGTGGTAGCTTAGCTGGTGCAGGAATTGTGGGCATTCTGCAAAAGATGGAAGAGGACTCAAAAGGTCTCATCTTTGGAAAGAGAACTGTTGTTGCCATTGATGGGGGCTTGTATGAAAATTATCCTCATTACAGAGCTTACTTGCTAGATTCAGTTAAGGAGCTGTTAGGAACAGAGAAGTCAAACAATGTGGTGATAGAGCTTTCAAAAGATGGATCTGGCATTGGAGCTGCTCTATTAGCTGCTTCAAATTCCATGTACAAGCAAGACTTTTAG 1479 0.4476 MSVVSVTVPATVGSFPSRSRLRRLTAALRSDTVSVGPTRILTKLKQECATPLPLLQQVAHTMTSEMRAGLAGGPGLPMIPTFVENLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIATEFDQVSIPQELMFGTSEELFDFIALALANFVAKEDGRFHFLKGRKREIGFAFSFPVKQTSIDSGILIKWTKGFAVSGTAGRDVVACLNEAMERQGLDMRVSALVNDAVGTLAGAEYWDNDVMVAVILGTGTNACYVEQISAIPKLQGHVSSSGKMIINTEWGSFSNGLPLTEFDREMDADSINPGQQIFEKTISGMYLGEIVRRVLLKMAEEDGLFGKSVPQKLSMPFILGTPDLCAMQQDNSGDLQAVGSLLYDKAGVEPKLSERRTVLEVCDAIVKRGGSLAGAGIVGILQKMEEDSKGLIFGKRTVVAIDGGLYENYPHYRAYLLDSVKELLGTEKSNNVVIELSKDGSGIGAALLAASNSMYKQDF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02616 492 Gene3D - 61 471 - -
Rops9g02616 492 SUPERFAMILY Actin-like ATPase domain 37 240 IPR043129 -
Rops9g02616 492 Pfam Hexokinase 245 483 IPR022673 GO:0005524|GO:0005975|GO:0016773
Rops9g02616 492 Pfam Hexokinase 42 238 IPR022672 GO:0005524|GO:0005975|GO:0016773
Rops9g02616 492 ProSiteProfiles Hexokinase domain profile. 35 483 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Rops9g02616 492 CDD NBD_sugar-kinase_HSP70_actin 97 259 - -
Rops9g02616 492 PANTHER HEXOKINASE 38 486 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Rops9g02616 492 Gene3D - 81 482 - -
Rops9g02616 492 FunFam Phosphotransferase 81 249 - -
Rops9g02616 492 PRINTS Hexokinase family signature 309 331 - -
Rops9g02616 492 PRINTS Hexokinase family signature 222 238 - -
Rops9g02616 492 PRINTS Hexokinase family signature 245 259 - -
Rops9g02616 492 PRINTS Hexokinase family signature 391 413 - -
Rops9g02616 492 PRINTS Hexokinase family signature 170 195 - -
Rops9g02616 492 PRINTS Hexokinase family signature 468 484 - -
Rops9g02616 492 PRINTS Hexokinase family signature 96 112 - -
Rops9g02616 492 SUPERFAMILY Actin-like ATPase domain 242 486 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02616 Rops-Chr9 48950346 48953859 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02616 9 48950346 48953859 Rops9g02616 9 48950346 48953859 ECH