Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02573 ATGCTTGATTCCGTGCTTCTGGCGCTTTTCTTGCCCTGTCTCGGCATGAGCGCTGTCTTCATAGTTTACATGTGCCTTCTCTGGTACGCCACCGCCCACCAACCGGAACCCAGGCTACCGGCTAAGTCCGTTTCCGATAAGGGACTTTCCCCTTCGGAGCTTGAAAAATTGCCTAGAATCACCGGAAAGGACCTTCACATGGGAACCGAATGTGCTGTTTGCCTTGACGAGATCGGGAACGACCAACCGGCAAGGGTGATTCCCGGTTGCAACCATGGGTTTCATTTGGAATGCGCTGACACGTGGCTTTCCAAACACCCTCTCTGTCCGGTTTGTAGAGCCAAACTCGATCCTATCCTTTTCACTCCCTCTGATAATCCATGTTGA 387 0.522 MLDSVLLALFLPCLGMSAVFIVYMCLLWYATAHQPEPRLPAKSVSDKGLSPSELEKLPRITGKDLHMGTECAVCLDEIGNDQPARVIPGCNHGFHLECADTWLSKHPLCPVCRAKLDPILFTPSDNPC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02573 128 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
Rops9g02573 128 Pfam Ring finger domain 70 113 IPR001841 -
Rops9g02573 128 SMART ring_2 71 112 IPR001841 -
Rops9g02573 128 SUPERFAMILY RING/U-box 70 121 - -
Rops9g02573 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 119 IPR013083 -
Rops9g02573 128 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 5 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02573 Rops-Chr9 48155328 48155714 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02573 9 48155328 48155714 Rops9g02573 9 48155328 48155714 ECH
Rops9g02573 9 48155328 48155714 Rops10g02497 10 43596472 43597440 PCT