Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02336 ATGCGTTTGAGAACTTTACTTTCCCTTTACACTTCAAGGCACACAATAAAAAAACTCAATGCAATCTCAAGATCCCCTTTTACCACCTTACTTTCTTCAAATTCAAACGACACTTGCACCAGTCGTTTCATCTTCCAACTACTTCCCATTTCACCACTCACCAGAAACCTTCATTCCTCTCAACTCAGCAACTCGCTCGTCGAACCGGAACGAGTTCTGATTCACCAAAACGACGACGTCGAAGAAGATGATGGAACAACGAACGAGTTCCTCTCCCGATTCGCATGGATAATGCGAAAAAAGGTGAAAGAAGCATACCCTGAATCTGATAAAAACACCATCGATACCATGCTTCTCGTGATCGTTGAAAAGGTAGTTTCGGAAATGGAAAAGGGTGGTCTTGATTCAACGGCGTCGTTTTCAGGGGATGGTGATTTCAGTGCGGATTTGTGGAAAACGGTGTGGGAGGTTTGTAACAAGGTGGTTGAAGACATGAATAAAGAGAGAAAGAAAGAGAACATGAAGGGTTTTTTGCAATGTGAGGAAGTGAAAGAGATGTGTAGGTTTGCTGGTGAAGTTGGAATTCGTGGGGATTTGTTAAGAGAGCTTAGGTTCAAATGGGCACGTGAGAAAATGGAGGAACATGAGTTTTATAAGGGTTTGGAGAAACTAAGAAAACAGGGACAAATGGAAGAAGCAGAACATGAGGGAAGTGAGAATGTTAATGTTAATGTTGCTGAGGAGAAGGATACTAAGGCTGTTGGACTTCCTAAGAGGAAGGGGAAGATAAGGTACAAGATTTATGGACTTGATTTGTCTGATCCTAAGTGGGGACAAGTGGCTGATAGGATTCATGAGGCTGGACAAGTGCTTTGGCCACTGGAACCAAAGCCAATAACTGGGAAATGCAAACTTGTTACTGAGAAAATTGTGTCATTGAAGGAGGTGGATGATGATAACTTGTCAAGCTTGTTGGCTGAGTGGGTGGAGCTTCTAGAACCTAGCAGGGTGGATTGGATCAATTTGCTTGACAGATTGAAAAAGGAGAATCCTCCTTTGTACTTAAAGGTGGCAGAAATGGTATTGACTGAAGATTCTTTCCAAACAAATGTATCTGACTACTCTAGGCTTATTGATATCTATGCTAAAGAAGACCGCTTTGATGATACTGAGAGGATCCTTAAGAAGATGAACGAAAAGGGTATACCATTAGATGCTTCAACAGCTAGTACATTGGTCCATATGTACAGCAAGGGAGGCAATCTCGAACGCGCAAAAGAAGCATTTGAAGTCTTGAGTAGCCAGGGCTTCCAACCAGATGTAAAAGTCTACACATCAATGATCATGGCCTATGTAAATGCTGGTAAACCTAATATGGGTGATACTTTGATAAGGAAGATGGAGACAAGTGATATTAAGCCCACTTTAGAAATATACATGGCATTGCTCCGATCTTATTCTCAACATGGCGATGTTATTGGAGCGGGACGAATTTCAACCACCATGCAGTTTGCAGGATTCCAGCAGACTATGGAGACATGCACCCTGCTTATTGAGGCACATGCACGTGCAGGTGACCCAGATCAGGCAAGAAGCAACTTTGACTACATGCTAAAATTTGGGCATAAGCCTGATGATAGGTGCACTGCTAGCATGATTGCGGCTTATGAGAAGAAAAATTTATTGGACAAGGCATTAAACCTTCTTTTGGAGTTAGAGAAGGATGGGTTTGAGCCTGGGGTTGAAACTTATTCGGTTCTTGTGGACTGGTTGGCTAAGATGCAGCTTGTTGATGAAGCTGAACAGCTTTTAAGCAAAATTGCTTTACTCGGTGAGGCTCCTCCTTTTAGGGTTCAAGTGAGCCTCTGTGATATGTATTCAAAGGTTGGAATGGAGAAAAAAGCCCTTCAAACTCTGGGCGTTCTGGAAGCTAGGAAGGATGAATTAGGACCAGATGAGTTTGAGAGAATTATATATGGCCTTATTGGTGGGGGGTTCCAGCAGGATGCACAAAGAATGTGTGGGATCATGGAGGCACAGGGTTTCACTGCTTCAGATCGGCTTAAGTCAGCCATTAAATCTATCCTCATAAAACCAAGGAGGAGGTAG 2109 0.4282 MRLRTLLSLYTSRHTIKKLNAISRSPFTTLLSSNSNDTCTSRFIFQLLPISPLTRNLHSSQLSNSLVEPERVLIHQNDDVEEDDGTTNEFLSRFAWIMRKKVKEAYPESDKNTIDTMLLVIVEKVVSEMEKGGLDSTASFSGDGDFSADLWKTVWEVCNKVVEDMNKERKKENMKGFLQCEEVKEMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYKGLEKLRKQGQMEEAEHEGSENVNVNVAEEKDTKAVGLPKRKGKIRYKIYGLDLSDPKWGQVADRIHEAGQVLWPLEPKPITGKCKLVTEKIVSLKEVDDDNLSSLLAEWVELLEPSRVDWINLLDRLKKENPPLYLKVAEMVLTEDSFQTNVSDYSRLIDIYAKEDRFDDTERILKKMNEKGIPLDASTASTLVHMYSKGGNLERAKEAFEVLSSQGFQPDVKVYTSMIMAYVNAGKPNMGDTLIRKMETSDIKPTLEIYMALLRSYSQHGDVIGAGRISTTMQFAGFQQTMETCTLLIEAHARAGDPDQARSNFDYMLKFGHKPDDRCTASMIAAYEKKNLLDKALNLLLELEKDGFEPGVETYSVLVDWLAKMQLVDEAEQLLSKIALLGEAPPFRVQVSLCDMYSKVGMEKKALQTLGVLEARKDELGPDEFERIIYGLIGGGFQQDAQRMCGIMEAQGFTASDRLKSAIKSILIKPRRR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02336 702 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Rops9g02336 702 Pfam PPR repeat 551 577 IPR002885 -
Rops9g02336 702 Pfam PPR repeat 583 607 IPR002885 -
Rops9g02336 702 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 440 474 IPR002885 -
Rops9g02336 702 Gene3D Tetratricopeptide repeat domain 486 699 IPR011990 GO:0005515
Rops9g02336 702 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 405 439 IPR002885 -
Rops9g02336 702 NCBIfam pentatricopeptide repeat 408 441 IPR002885 -
Rops9g02336 702 NCBIfam pentatricopeptide repeat 443 475 IPR002885 -
Rops9g02336 702 NCBIfam pentatricopeptide repeat 513 545 IPR002885 -
Rops9g02336 702 NCBIfam pentatricopeptide repeat 374 405 IPR002885 -
Rops9g02336 702 PANTHER OS07G0661900 PROTEIN 97 690 - -
Rops9g02336 702 Pfam Pentacotripeptide-repeat region of PRORP 371 530 IPR033443 -
Rops9g02336 702 Gene3D Tetratricopeptide repeat domain 307 453 IPR011990 GO:0005515
Rops9g02336 702 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 510 544 IPR002885 -
Rops9g02336 702 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 370 404 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02336 Rops-Chr9 42888153 42891320 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02336 9 42888153 42891320 Rops9g02336 9 42888153 42891320 ECH