Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02310 ATGGCTGAACGCGCCACCTCCGATTCTCTCTTCAATGTCACCACTGTACCTCCATTGCAGATCTCCAAAGATGTCCAAGGCTCCAACAATCCTATTCCACTTTCACCACAGTGGCTCCTGCCAAAGCCCGGGGAGAGTAAACCTGGAACAGGAACTGTGGAAAGCCATGCGATCTCAAATCCACCATATGGCAATCACACAGAGACTCTTAAGACACCTGGTAATGGAGAGGATGCACATGATGCCCATAAGAGAAAGGATGTCTTTAGGCCATCCATGTTTGACTCAGAAAGTGGACGCCGTGATCGTTGGCGTGATGAAGAGAGAGACACTAAGTCCTCCATACGGAAGGATCGTTGGAGGGATGGAGACAAAGACCTAGGTGATTCTCGGAGAATGGATCGATGGACTGAAAATCTGCCTACGAAGAACTTTGGAGAAGCACGTCGGAGTACGTCTGATAGTCATAGATGGAATGATTCAGGAAACCGAGAAACTAACTTTGATCAGCGGCGTGAGAGTAAATGGAACACACGTTGGGGTCCTGATGATAAGGAACCAGAAGGTCAGCGTGAAAAATGGAGTGACTCTGGGAAAGACAGTGATATACATCTGGACAAAGGCTTGTCTCACATTTACAATCATGGAAAGGATGAGAAGGAGGGAGATCACTATCGGCCAAGGAGACCTAACTACTCACAAAGCCGTGGAAGGGGAGAGCCTCTCTATTCCCAAAATACAACGCCAAGCAAACAAGTCTCTACATTTTCCTATGGGCGTGGTCGTGGGGAGAATACACCTCCAGTCTTTAGTCTTGGACATGGCCGTGCTGGCTCTGGTGGTAGCTCTTTGAATAGCACATATCCTGGAAATGCATTGGATAAAATCGAAAGTGGACATGAAGAACCTTGCCCCTTTAAATATAATAGGACAAAATTGCTTGATGTGTACCGAGTGACTGATATGGGTACAAATAGAAAACTAGTTGATGATTTTGTGCAGGTGCCTAATCTTACACAGGATGAACCTTTGGAGCCTCTAGCGGTTCTGCCACCAAATTCTGAGGAACTGTCTGTCTTAAATGGTATCAACAAAGGGGAAATAACTGGTAGCAGTGCTCCTCAGGTGCCAAAAGATGGAAGGGGCTCATCAGATTTTACTCATACTAGACGAATGAAGCTTGGAAGTGCACCTCTCCCAGATAGAGGTGAAGATGGAGGTTCCTACAGAGTGGTTGATAAGTTGTCCGGTAATAGAGATTCATCCATAGAAGGAAATAGTTCTGTTAATCCTGTTGCTGCATGGCGAGCCATGCCGGTGGGAGAACATGTTACTACTCTCTTGCATGATAGCAGAGATGTACCTAGTGATGTCAGATTAAGAAAATCAGATATGAGCTCACACCAGCCTAGAGATCCTCATAATCAGTGGGAAAATAATTTGGGTTATTTATCTGACTCCAAAGAAATAGGTAAGTGGCAAGCTGGTGAGGATCCCATTGTCAAGAGGCAGCTGTCTGGCATTTCAGACAGTGAACTTGAAAACAGGAGAGTTCCTCCGACTGCTCCAGAGGAGTTATCCCTTTTCTATAAAGATCCTGAGGGTCAAATCCAAGGTCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGATACTTCAGTATTGATTTACCTGTTCGTCTGGACAATTCAGCAGTTGACTCCCCATGGTTGTCTCTTGGTGATGTCATGCCTCATTTACGCGCTAAAGCCCGACCACCTCCCGGATTTTCTGCACCAAAACCGAATGACTTTACAGATTTAACTGGCCAGCAAAATTCTAGTATGTTTGGAAATACCCTTGCTGGATTGAGTGAGGTTGACATATTAAAAAGTGATTCTAGACATAGGCAGGGTTTTGACACTGAAGCCGAAAATAGGTTTCTGGAGTCCCTCATGTCAGGTAACAAGAGCAGTCCTATACCTGACAGTCTGACATTATCAGAAGGTTTTCAAGGGTTTGCTGGAAATAATTCTGGTAATTTGGGCCCATCAGGAGTAGAAAGTGGAAACAACCTGTACTTACTTGCCAAGAGGATGGCACTTGAACGACAGATGTCCTTACCCAATCCTTACCAATATTGGCCAGGGCGGGATGCAACTTCTCTTGCTCCAAAATCTGATGTTCTCCCAGATGCTTCACTGCATTCAAAAATCTTGTCTTCAGTGAGTGACAATTCCCGTCAACCTCAGTCCCAAAATTCCGAGTTGATGTCAATCATCCAAGGATTATCTGACAGGACATCTGCCGGCATAAATAATGGTGCTGCTGGATTGCCAAATCGTCCTGTACCAGGTGGATTGGATCTCCTTCAGAATAAAACTGACTTACTTCATGATCAAAATTTCCCTCAAACGCCATTCGGAAGTCAACAACAAAGGCTGCCAACACAAAACCAGTTGTCTTTAAGCAATTTACTGGCTCAAGCTGCCAATAACCCATCCAATACTTTTATAGCAGAGAAGTTACTTTCTTCTGGTTTAACGCAAGACCCACAAATATTGAATTTGTTGCAACAGCAATATGTGTTGCAGATGCATTCTCATGCAGCTGCTCCAGCACAGCAGTTACCCCTGTTGGATAAACTCCTGTTGCTGAAGCAGCAACAGATGCAGGAGGAGCAGCAGCTGTTATTGCGGCAACAACTTCTTTCTCAAGTGTTGCAGGATCAACAGTCTAGCCAACTCTTTGGTAATTCATCTTATGGACAGTTGCAAGGTGGATTGCCGATGGGGAATTTGCATGTGGATCCTTCTCAACTTCAACCACCACAAGATATTTTTCCAATGACTTCTCAGACACCAATTCCCAGTGTGCGCAATGAACTTAGTACTGATTCTTTGAATTCACCTTTGAAAGTTGGCCAAGAGCCAAGTTATAATGTAAGAAGTGAAGCTTCTATACATCTGCCTCACCCATTGTTTGGGGATACCAGTCCTCAGAAAAACTGGGGTCCGACTCTTCCTGAGCAAATTAAGGAAAACCATCAGAAGGAAATGTTCCCCGCATCGAAATCTCTTGTTGAGAGTTCCCTATTGCATGACCAGAACAGATCCAAAGAGGAGCCTCGCATTGTGCAAGAACCTGTTTCTGTTTCTGACCATACTGCTCAGTCTGTGGAGCAGGTAGACAGCACCTTGAAACCTGATGATATTAGCAAGAATGCAGCTTCTAAGCCTTGTGAGAATTCTGGACATCTGCAGTATGTTGCACCTGCTGTTGATATATCTTCAGCTGGATCTAGTGGGATTGTGTTACCCCCAGTGAGTAATCTTGGATTGGATGTGAAGATCAATTCAGATATTGTGCATCAGGAGCAGCTGGCTGGAACAGACCGCTCCACTGCTGAGCCCTCTGTCGGAGATGTAAGAAATGTTGAAGCACATGAACCTAAAAAGGCTTCTGAGAAGAAATCTAAGAAGCAAAAATCTACCAAATCTCAATCTTCCGATCAAGCAAAGGGATTGCTAAAAAATGTGACTTTGCAGCCATCAAAGAAGTCAGAAGTTGAAATGCCAAATTTTAATGAGTTGAGGGAAGCCAACAAGGAGGAACTAAGTGAAACATATCTGCAACAAACAAAAGTTAAGGGAAATCAGACTGGAAATGATGTCCTGGAGACAGCTGATCATCATGAAGTTAATGGCCTGTCTGCCAGTGTTGCTAGAAACATCACTGAAACAGATCTTGTGGGCGAGTCTAAGGCAGCTGGTTCTGTTTCCACCCAAAATAGTGAAGTACCTGCAGGACGAGCTTGGAAACCTGCTCCGGGTGTCAAGGCAAAGTCTTTATTAGAAATTCAACTGGAAGAACAGAGAAAGGCGGAGACGGAAATGCTTGTATCTGATGTTGCTACTTCTGTCGGTTCCATGAGTCTGAATACTCCCTGGGTTGGGGTTGTGGCCAATCCAGACTCTGTAAAAGTATCTAGTGAAAGTCACCGAGGAGGCAATACAGAATATCCTGTTAAATCTGAAACTTCTCAAAGTGTTAAGAACAAGAAAAGTCCACTACATGATCTATTAGCAGAAGAAGTTTTAAAGAAAGCTAATGAAAGAGATACTGAGGTTCCAGATAGTACATTGTCCTCACATAATATAGCTGTGCATTCGGATACACTAGATGATAGCAACTTTATTGAGGCAAAAGATACTAAACGAAGCCGTAAAAAGTCAACAAAAGCAAAGGGTTCAGGAGCTAAGGCCCCAGTCGCTGTTGCATCTGCTGAAGTACCTATAGCTTCAAGCCCCATTGAAAAAGGTAAAAGTTCCCGCTCTGCACAACAGGAGAAAGAAGTATTGCCTTCCATACCTGCAGGACCCTCGCTGGGAGATTTTGTTTTCTGGAAAGGAGAGCGAGAGCCACCAAGCCCATCTCCTTCTCCAGCATGGTCTACTGATTCTGGTAGGGTTCCTAAACCAACTTCATTAAGGGACATTCTGAAGGAGCAGGAGAAAAAAGCTTCTTCTGCAGTCCCTGCAAGCCCAGTGCCTACCCCTCAGAAGTCACAGCCTGCTCAGGCTACTTTGAATAGTGCTTCTTCACGGTCAATTTCAGCTTCCTCTCCATCTAAAGTTGCCTCTCTGATTCAGATAAACTCCCATGCATTATCTCAGTCAAAATACAAAGGGGATGATGACTTGTTCTGGGGTCCAATTGAGCAATCCAAGCAAGAAACTAAGCAGTCAGATTTCCCTCAGCTTGCAAGCCAGGGAAGCTGGGGACAGAAAAATGTACCCTTGAAAGGTAATTCACCTGGATTAACACGGCAAAAATCCACGAGTGGCAAATCAACTGAACGGTCTCTATCATCATCACCTGCCTCTTCTCAATCAGTGCTGAAATTGAAAAATGATGCCATGACTAAGCATTATGAGGCCATGGGCTTCAGAGATTGGTGTGAGAATGAGTGTGTCAGGCTTATAGGGACAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCAGAAGCTGAGATGCTTCTTATAGAAAACCTTGGATCATATGACCGTGACCATGAATTCATTGATAAGTTCCTCAATTACAAGGAGTTGTTACCATCAGATGTGTTGGACATAGCTTTTCAGAGTAGGAATGATAAGAAAGTTGCTGGACCTGGTGCTGCAGGCATGGTGTCAGCAAATGCAGATTTACAGGATGTGGACCGCACTGAAGGATCCTCTAAAGGAGGTGGAAAGAAGAAGGGTAAAAAGGGGAAAAAAGTTAGCCCTGCAGTTTTGGGATTTAATGTTGTGAGTAACCGGATCATGATGGGTGAGATCCAGACTTTAGAAGATTAA 5355 0.4418 MAERATSDSLFNVTTVPPLQISKDVQGSNNPIPLSPQWLLPKPGESKPGTGTVESHAISNPPYGNHTETLKTPGNGEDAHDAHKRKDVFRPSMFDSESGRRDRWRDEERDTKSSIRKDRWRDGDKDLGDSRRMDRWTENLPTKNFGEARRSTSDSHRWNDSGNRETNFDQRRESKWNTRWGPDDKEPEGQREKWSDSGKDSDIHLDKGLSHIYNHGKDEKEGDHYRPRRPNYSQSRGRGEPLYSQNTTPSKQVSTFSYGRGRGENTPPVFSLGHGRAGSGGSSLNSTYPGNALDKIESGHEEPCPFKYNRTKLLDVYRVTDMGTNRKLVDDFVQVPNLTQDEPLEPLAVLPPNSEELSVLNGINKGEITGSSAPQVPKDGRGSSDFTHTRRMKLGSAPLPDRGEDGGSYRVVDKLSGNRDSSIEGNSSVNPVAAWRAMPVGEHVTTLLHDSRDVPSDVRLRKSDMSSHQPRDPHNQWENNLGYLSDSKEIGKWQAGEDPIVKRQLSGISDSELENRRVPPTAPEELSLFYKDPEGQIQGPFKGIDIIGWFEAGYFSIDLPVRLDNSAVDSPWLSLGDVMPHLRAKARPPPGFSAPKPNDFTDLTGQQNSSMFGNTLAGLSEVDILKSDSRHRQGFDTEAENRFLESLMSGNKSSPIPDSLTLSEGFQGFAGNNSGNLGPSGVESGNNLYLLAKRMALERQMSLPNPYQYWPGRDATSLAPKSDVLPDASLHSKILSSVSDNSRQPQSQNSELMSIIQGLSDRTSAGINNGAAGLPNRPVPGGLDLLQNKTDLLHDQNFPQTPFGSQQQRLPTQNQLSLSNLLAQAANNPSNTFIAEKLLSSGLTQDPQILNLLQQQYVLQMHSHAAAPAQQLPLLDKLLLLKQQQMQEEQQLLLRQQLLSQVLQDQQSSQLFGNSSYGQLQGGLPMGNLHVDPSQLQPPQDIFPMTSQTPIPSVRNELSTDSLNSPLKVGQEPSYNVRSEASIHLPHPLFGDTSPQKNWGPTLPEQIKENHQKEMFPASKSLVESSLLHDQNRSKEEPRIVQEPVSVSDHTAQSVEQVDSTLKPDDISKNAASKPCENSGHLQYVAPAVDISSAGSSGIVLPPVSNLGLDVKINSDIVHQEQLAGTDRSTAEPSVGDVRNVEAHEPKKASEKKSKKQKSTKSQSSDQAKGLLKNVTLQPSKKSEVEMPNFNELREANKEELSETYLQQTKVKGNQTGNDVLETADHHEVNGLSASVARNITETDLVGESKAAGSVSTQNSEVPAGRAWKPAPGVKAKSLLEIQLEEQRKAETEMLVSDVATSVGSMSLNTPWVGVVANPDSVKVSSESHRGGNTEYPVKSETSQSVKNKKSPLHDLLAEEVLKKANERDTEVPDSTLSSHNIAVHSDTLDDSNFIEAKDTKRSRKKSTKAKGSGAKAPVAVASAEVPIASSPIEKGKSSRSAQQEKEVLPSIPAGPSLGDFVFWKGEREPPSPSPSPAWSTDSGRVPKPTSLRDILKEQEKKASSAVPASPVPTPQKSQPAQATLNSASSRSISASSPSKVASLIQINSHALSQSKYKGDDDLFWGPIEQSKQETKQSDFPQLASQGSWGQKNVPLKGNSPGLTRQKSTSGKSTERSLSSSPASSQSVLKLKNDAMTKHYEAMGFRDWCENECVRLIGTKDTSFLEFCLKQSRSEAEMLLIENLGSYDRDHEFIDKFLNYKELLPSDVLDIAFQSRNDKKVAGPGAAGMVSANADLQDVDRTEGSSKGGGKKKGKKGKKVSPAVLGFNVVSNRIMMGEIQTLED* 1785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02310 1784 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1784 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1509 1540 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 455 471 - -
Rops9g02310 1784 Pfam GYF domain 529 572 IPR003169 GO:0005515
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1249 1269 - -
Rops9g02310 1784 SUPERFAMILY GYF domain 515 582 IPR035445 -
Rops9g02310 1784 ProSiteProfiles GYF domain profile. 525 576 IPR003169 GO:0005515
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1029 1043 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1352 1374 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 237 261 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1138 1162 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 368 408 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1323 1350 - -
Rops9g02310 1784 SMART gyf_5 526 581 IPR003169 GO:0005515
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1123 1189 - -
Rops9g02310 1784 CDD GYF 525 582 IPR003169 GO:0005515
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1046 1077 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1163 1185 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1732 1759 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1027 1078 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1572 1627 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 73 138 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 52 72 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 149 230 - -
Rops9g02310 1784 Gene3D - 514 592 IPR035445 -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1 262 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 455 479 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1323 1540 - -
Rops9g02310 1784 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02310 Rops-Chr9 42604454 42614039 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02310 9 42604454 42614039 Rops9g02310 9 42604454 42614039 ECH
Rops9g02310 9 42604454 42614039 Rops10g02368 10 41753780 41763053 PCT