Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02298 ATGGCTTCCGACGGAGCAACTTCGGCGGCGACGAGTCGGAGGAAGCCGTCATGGAGGGAGAGAGAGAATAACAGGAGGAGAGAGAGAAGAAGAAGAGCCATAGCAGCGAAGATATATAGTGGTCTTCGATCTCAAGGGAACTATAACTTGCCAAAACAATGTGATAACAACGAAGTTCTAAAAGCTCTCTGTTCAGAAGCTGGTTGGTTCGTTGAAGAAGACGGCACCACCTATCGCAAGGGTTGCAAGCCTCCTCTTGCCAATGGTGCAAGCACCTCAACGAGAAACACCCCTTTCACTTGTTCACAGAATCCAAGTCCTGTGTCTTCATCTTTTCATACTCCAATTCCTTCCTACCAAGTGAGCCCTTCCTCATCCTCTTTCCCAAGCCCTTTTCGTTTGGATGGGGACAGTGCATCAAACCTCATCCCATACATTCGAAGTGCTATTCCTGGGTCTCTCCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACTCCACCTCTCTCATCACCAACATCAAGAAATCCCAAACCAATTCCCACATGGGAGTCTATAGCAAAAGAATCCATGGCCTCTTTTAATTACCCTTTCTTTGCAGCTTCTGCCCCAGCTAGCCCAACACATCGTCACATTCATACCCCAGCTACTATTCCGGAATGTGTTGAATTTGAATCTGATACTTCCATTTCTGGCCAGTGGATGAAATTCCAACCATTTGGCCCCTCTGCATCTGGGGGGACAATTCCCCCAACCTTCAATCTTAATAAATCTGTGGTTCAGCATGGTGTGCCTGATGACTCAATCCAAGAGATGAGAAGTTCTGAAGAGTTTGGGGTGCAGGTGAAACCTTGGGTTGGGGAAAAAATTCATGAAGTGGGATTGGATGATTTGGAGCTCACACTTGGAAGTGGGAAAGCAAGGAGTTAA 930 0.4731 MASDGATSAATSRRKPSWRERENNRRRERRRRAIAAKIYSGLRSQGNYNLPKQCDNNEVLKALCSEAGWFVEEDGTTYRKGCKPPLANGASTSTRNTPFTCSQNPSPVSSSFHTPIPSYQVSPSSSSFPSPFRLDGDSASNLIPYIRSAIPGSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPFFAASAPASPTHRHIHTPATIPECVEFESDTSISGQWMKFQPFGPSASGGTIPPTFNLNKSVVQHGVPDDSIQEMRSSEEFGVQVKPWVGEKIHEVGLDDLELTLGSGKARS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02298 309 MobiDBLite consensus disorder prediction 1 31 - -
Rops9g02298 309 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 308 IPR033264 GO:0003700|GO:0006351|GO:0009742
Rops9g02298 309 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 138 IPR008540 -
Rops9g02298 309 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02298 Rops-Chr9 42438610 42440822 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Rops9g02298 BES1_N 8.3e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02298 9 42438610 42440822 Rops9g02298 9 42438610 42440822 ECH
Rops9g02298 9 42438610 42440822 Rops10g02358 10 41615890 41617593 PCT