Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02282 ATGCGGAAGGAACAATCCCAGTCTCCTTGCCTAACAGATGTGGAGCCAGATAGAATCAGTGGTTTACCAGGTCATGTAATAGACCAAATTCTCTCACATTTGCCAATTAGGGATGCAGTGAGAACAAGTATTTTATCCAGCAAATGGAGGTTCAAATGGGCCACACTACCAAATCTTGTGTTTGATAACCAATGTGTCTCTGTGGCTTCCCAAGACCATTCAGTTATCAAGAACAAGCTTTTGAGAATTATTGATCATGTGTTTATACTTCATTCTGGGCAAATCAACAAGTTCAAGCTCTCCCATCGTGATATCATTGGTGTGACTGATATTGATCGCTGGACTCTTCATCTATCCAGAAGGTCTATTAAAGAGTTTGTGCTGGAAATCTGGAAAGGACAACGCTATAAGATACCTTCGTGCTTATTTTCTTGTCAAAGTTTAACTCATTTAGAATTATTTAATTGTTGGCTTAAACCTCCATCAGCATTTCAAGGCTTCAGGAACTTGAAAAGTCTTGATCTACAACATGTTACCTTGGCTCAAGATGTTTTTGAAAACTTGATATCCAGTTGCCCTCTGCTTGAACGGTTAACATTGATGAACTTTGATGGTTTCACTCATCTTAATATTGATGCGCCAAATCTCCAGTTTTTTGACCTTGGAGGTAAATTTGAGGATATTAACTTTGAGAACACTTTCCAATTAGCGGTGGTATCCATTGGTTTGTACAATCAAAGTAGATTGCATGGAGGTTCTAGAAATTTGTTCAAATTTTTTGTTCATCTACCTCGCATACAAAGGCTAGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAATCGGAAATGTGCCAGAAAAGCTTTCTAGACCTTGCATTGATCTAAGTTATCTTTCCATACGCACAAACTTCAATGATATGAAGGAAATGGAAGCTGTTCTTTGCCTGTTAAGAAGCTCACCAAATCTACAAGAACTAGAAGTATTGGCTCGACCTGAGGAGCAGACTGGTCTGTTAACAGAAGACACTCATTGTTGGGAAGTTGTCTATTACAGTTGTCCTGTCATGCAACTGCGATCTGTGAGGATAGATGGCATCTCTGGTATCAAACATGAATTAGATTTTATCAGATTTATACTTCTAAATTCCCCTGTGCTAGAAAGGATGAATGTGAAGCCAGCTGTTACTGGATTGGAGTTGATAAAAGAACTATTGCGGTTCAGGAGAGCCTCAGGGCGAGCTGAAGTTATTTACCAGGAACCTTCATAA 1269 0.3885 MRKEQSQSPCLTDVEPDRISGLPGHVIDQILSHLPIRDAVRTSILSSKWRFKWATLPNLVFDNQCVSVASQDHSVIKNKLLRIIDHVFILHSGQINKFKLSHRDIIGVTDIDRWTLHLSRRSIKEFVLEIWKGQRYKIPSCLFSCQSLTHLELFNCWLKPPSAFQGFRNLKSLDLQHVTLAQDVFENLISSCPLLERLTLMNFDGFTHLNIDAPNLQFFDLGGKFEDINFENTFQLAVVSIGLYNQSRLHGGSRNLFKFFVHLPRIQRLEVQSYFLKYLAIGNVPEKLSRPCIDLSYLSIRTNFNDMKEMEAVLCLLRSSPNLQELEVLARPEEQTGLLTEDTHCWEVVYYSCPVMQLRSVRIDGISGIKHELDFIRFILLNSPVLERMNVKPAVTGLELIKELLRFRRASGRAEVIYQEPS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02282 422 SMART 9598neu4hmm 352 419 IPR006566 -
Rops9g02282 422 Pfam F-box domain 19 50 IPR001810 GO:0005515
Rops9g02282 422 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Rops9g02282 422 Gene3D Ribonuclease Inhibitor 84 401 IPR032675 -
Rops9g02282 422 SUPERFAMILY F-box domain 16 67 IPR036047 GO:0005515
Rops9g02282 422 PANTHER F-BOX PROTEIN-LIKE 17 394 - -
Rops9g02282 422 SUPERFAMILY RNI-like 116 328 - -
Rops9g02282 422 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Rops9g02282 422 Pfam FBD 356 390 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02282 Rops-Chr9 42254240 42257445 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02282 9 42254240 42257445 Rops9g02282 9 42254240 42257445 ECH