Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02274 ATGGCGAAATCGAGCGCCGACGATGTCGAACTCCGGCGAGCCGTCGAAGCTGCAATTGAGGATCCAAAGCAGAAGATCGTTTTGTCTCTTCGTGTCGCCAAGAGTCATGGAATCTTAGGAAAATCTTCCAAGCTTGGTCTTCAAATGGCCAAGCCTAGGGTTCTAGCTCTCTCCACGAAATCGAAAGGTCAGAGCACAACAGCTTTTCTTCGAGTTTTGAAGTATTCTACGGGAGGAGTTCTTGAACCTGCAAAACTATACAAGCTAAAGCACCTCTCAAAAGTGGAAGTTGTAACAAATGATCCCAGTGGATGTACATTTACACTGGGATTTGATAACCTTAGAAGCCAGAGCGTGGCTCCTCCTCAATGGACAATGCGCAATATTGATGACAGGAATCGCCTCCTGCTTTGCATCTTGACCATCTGCAAAGATGTTTTGGGTGGCCTTCCTAAGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCCCCTGTTTCTACTCAGAGTAACATGCAAGATGGTGGTCCCGTTGCATCTGCTGTGACTGACAGAGAGTTAAAAGTCAATGTTGAAAAGGAACTTGTCTCCCAGGCAGAAGAAGAGGACATGGAGGCACTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAAGAATTTTCTGAAAGGTTAAAGAGAGAGCTCCAGGCTCTAGAAGCTGCAAACGTGCATGCCATTTTAGAAAGTGAACCTTTGATAAATGAGGTGTTGCAAGGGCTTGAAGCAGCAACAAATTGTGTGGAAGATCTGGATGAATGGTTAGGCATATTCAATGTAAAACTCAGGCACATGCGGGAGGATATTGCATCAATAGAAACCCGCAACAACAACTTGGAAATGCAATCAGTAAATAGCAAATCTCTCATTGAGGAGCTTGATAAGCTTCTTGAGCGATTGCGTGTCCCTTCCGAGCATGCAGCATGTTTGACAGGAGGTTCCTTTGATGAAGCTCGAATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACTAGTGCCTTGCGTGGTCTTGAAGTGCCTAATCTAGACCCATGTCATGCAAACATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTGAAATCTACTTTTGTCAGGAGAGCTTCTGAATTCTTGAGAAATTACTTCGCTAGTTTAGTGGACTTCATGATAAGTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTGAAGAGGCCTGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGACAAGAATTGCTTGGGTCCGTTGAGAAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGGGAGGCCCGTGAGTTTGCAAATGAACTCCGTGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTTGAAGGTTCTGGTCAGAATGTAAATGCAACAGATACTTCTACAGTCTCTGATGCTTATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACGCTTGTTCCTCCCGGAGGTGTTGTTAATGGAAATAAATCTGGATATGATGATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAACAAATCTGGTAAAAATTCTGCAGAGCTTGCAGCTTTAAATGAATCACTTCAGGATTTACTTGACGGAATTCAGGAAGACTTTTATGCTGTTGTCGATTGGGCGTACAAGATTGATCCTTTACGCTGCATATCAATGCATGGAATAACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTCTTTTGCTTGGTGATCTAGAGTCTCGGATATCTATGCAGTTCAACCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAATGAACGCAATGTTCGCCAAATGGGTGTCCTATCCTACATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGACAGTCTAGGGATTTGGTTGACCAAGCATACACAAAATTTGTTAGCATAATGTTTGCAACTTTGGAAAAAATTGCACAAACAGATCCAAAGTATGCAGATATTTTTCTTTTTGAGAACTATGCCGCCTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCCACTTTGGCCAAGTTTTATCATCAAGCTAGCGAAGCCTATGAACAAGCTTGTACACGCCATATTAGCATGATTATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGGAGGATTGAGGACTTAATGTTCACTGTTCCACCTGAAGAGATTCCTTTCCAGCTTGGGCTGTCAAAAATGGATCTTAGGAAGATGTTAAAATCTAGTTTATCTGGGGTTGACAAGTCCATTGCGGCGATGTATAAGAAACTACAGAAGAATTTGACTTCTGAGGAACTGTTACCTTCCTTATGGGACAAATGCAAGAAGGAGTTTCTTGATAAGTACGAAAGTTTTGCCCAACTTGTGGCCAAGATTTACCCTACTGAGACTATCCCATCTGTAGCAGAGATGAGAGACCTTTTAGCTTCCATGTAA 2643 0.426 MAKSSADDVELRRAVEAAIEDPKQKIVLSLRVAKSHGILGKSSKLGLQMAKPRVLALSTKSKGQSTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVTNDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILTICKDVLGGLPKVVGIDVVEMALWAKENTPPVSTQSNMQDGGPVASAVTDRELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHAILESEPLINEVLQGLEAATNCVEDLDEWLGIFNVKLRHMREDIASIETRNNNLEMQSVNSKSLIEELDKLLERLRVPSEHAACLTGGSFDEARMLQNVEACEWLTSALRGLEVPNLDPCHANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKSGYDDDDDLGIMDIDENDNKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFNRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVPPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPTETIPSVAEMRDLLASM* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02274 880 Pfam Exocyst complex component Sec3 224 484 IPR019160 GO:0000145|GO:0006887
Rops9g02274 880 Pfam Exocyst complex component Sec3 572 863 IPR019160 GO:0000145|GO:0006887
Rops9g02274 880 Coils Coil 281 301 - -
Rops9g02274 880 Coils Coil 221 248 - -
Rops9g02274 880 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Rops9g02274 880 PANTHER SEC3/SYNTAXIN-RELATED 46 873 - -
Rops9g02274 880 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02274 Rops-Chr9 42085502 42115067 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02274 9 42085502 42115067 Rops9g02274 9 42085502 42115067 ECH
Rops9g02274 9 42085502 42115067 Rops10g02344 10 41288333 41318719 PCT