Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02261 ATGTTCGGTGAAAGCAATAACAACAACAACAACATCCCACGTCCACAGTTCATGCATTCGGAGCCCCGAATGTCAACGACGGAGGCCTTCACGGACGACGAATTCACCGTTAGAAGCAGCAGCGCCGCTTCACCAATGAGCCCTTATTACTATGAACATGGAAGGTTAAGCGGTGAAAGCTCACCCATGATGATGTCTCCATGGAACCAAACCGCAACCTCTCCATTCACCAAATCTCAATGGTCATCATCATCACAATACGACGACGTTGTTCCACAAAACGGACTCATTGGTTCTCTTGTTCGTGAAGAGGGTCATATATATTCCTTAGCAGCTTCTGGTGACTTATTATACACTGGTTCTGATAGCAAGAACATTCGTGTTTGGAAGAATCTTCAAGAGTATTGTGGCTTCAAATCAAACAGTGGATTGGTCAAAGCTATAATAATTTCTGGACAGAAAATCTTCACTGGTCATCAAGATGGTAAAATCCGTGTTTGGAAAGTGTCTCTCAAGAACCCTAGCGTTCACAAACGTGCAGGAACATTGCCAACGTTAAAAGACATTTTCAAAAGCTCAATCAAACCTAGTAACTACGTCGAGGTCCGTAGACACCGTACTGCGTTATGGATCAAACACTCCGACGCCGTTTCGTGTTTGAGTCTGTCGCATGATAAGACTTACCTCTATTCTGCTTCATGGGACAGGACAATTAAGGTTTGGAGAATCCAAGATTCTAAGTGTTTGGAATCCATTGCTGCACACGATGACGCTGTGAACTCCGTCGTTTGCGGCAACGACGGGGTTGTTTTTTCCGGTTCGGCTGACGGGACGGTGAAGGTGTGGCACAGGGAGGCTCGTGGGAAGGGAACTAAACACGCGCCGGTGAAGACGTTGTTACAACAGGAATGTGCGGTGACGGCGTTAGCGGTGGACCCCAAGGGGTCAATTATCTATTGTGGGGCCTCTGATGGGTTGGTTAATTTCTGGGAACGTGAGAAGCAGTTTTCTCATGGTGGGGTCCTCAAGGGTCATAAGCTTGCGGTTTTGTGTCTTGCTACTGCGGGGACATTGGTGTTTAGTGGTTCAGCTGATAAGACCATATGCGTGTGGAAAAGGGATGGGATGATTCACACGTGTGTGTCTGTGTTAACGGGACATGACGGTCCCGTTAAGTGTTTGGCCGTGGAGGAGGATCGTGAAGCCGCCGTGAAGGGTGATCAACGGTGGGTTGTGTATAGTGGCAGTTTGGATAAATCGGTTAAGGTTTGGAGTGTTTCTGAGATGATGCAGCACCGTGCGGTTTCTGATGTGGACTCACTGCCTTCGGAATCTGATGGTAGCTACTCTTCGGGCCGGGCCAATCATAACAGGAGAAACTGA 1383 0.4787 MFGESNNNNNNIPRPQFMHSEPRMSTTEAFTDDEFTVRSSSAASPMSPYYYEHGRLSGESSPMMMSPWNQTATSPFTKSQWSSSSQYDDVVPQNGLIGSLVREEGHIYSLAASGDLLYTGSDSKNIRVWKNLQEYCGFKSNSGLVKAIIISGQKIFTGHQDGKIRVWKVSLKNPSVHKRAGTLPTLKDIFKSSIKPSNYVEVRRHRTALWIKHSDAVSCLSLSHDKTYLYSASWDRTIKVWRIQDSKCLESIAAHDDAVNSVVCGNDGVVFSGSADGTVKVWHREARGKGTKHAPVKTLLQQECAVTALAVDPKGSIIYCGASDGLVNFWEREKQFSHGGVLKGHKLAVLCLATAGTLVFSGSADKTICVWKRDGMIHTCVSVLTGHDGPVKCLAVEEDREAAVKGDQRWVVYSGSLDKSVKVWSVSEMMQHRAVSDVDSLPSESDGSYSSGRANHNRRN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02261 460 FunFam BnaA09g28200D protein 200 287 - -
Rops9g02261 460 Gene3D - 198 289 IPR015943 GO:0005515
Rops9g02261 460 Gene3D - 290 457 IPR015943 GO:0005515
Rops9g02261 460 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 210 247 - -
Rops9g02261 460 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 252 282 - -
Rops9g02261 460 Pfam WD domain, G-beta repeat 104 130 IPR001680 GO:0005515
Rops9g02261 460 Pfam WD domain, G-beta repeat 296 330 IPR001680 GO:0005515
Rops9g02261 460 Pfam WD domain, G-beta repeat 247 282 IPR001680 GO:0005515
Rops9g02261 460 Pfam WD domain, G-beta repeat 213 241 IPR001680 GO:0005515
Rops9g02261 460 Pfam WD domain, G-beta repeat 340 372 IPR001680 GO:0005515
Rops9g02261 460 Pfam WD domain, G-beta repeat 379 425 IPR001680 GO:0005515
Rops9g02261 460 SMART WD40_4 292 331 IPR001680 GO:0005515
Rops9g02261 460 SMART WD40_4 377 425 IPR001680 GO:0005515
Rops9g02261 460 SMART WD40_4 245 283 IPR001680 GO:0005515
Rops9g02261 460 SMART WD40_4 203 242 IPR001680 GO:0005515
Rops9g02261 460 SMART WD40_4 131 168 IPR001680 GO:0005515
Rops9g02261 460 SMART WD40_4 335 372 IPR001680 GO:0005515
Rops9g02261 460 SMART WD40_4 93 130 IPR001680 GO:0005515
Rops9g02261 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 252 282 IPR001680 GO:0005515
Rops9g02261 460 MobiDBLite consensus disorder prediction 1 21 - -
Rops9g02261 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 299 331 IPR001680 GO:0005515
Rops9g02261 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 210 251 IPR001680 GO:0005515
Rops9g02261 460 MobiDBLite consensus disorder prediction 435 460 - -
Rops9g02261 460 CDD WD40 104 425 - -
Rops9g02261 460 ProSiteProfiles Trp-Asp (WD) repeats profile. 342 372 IPR001680 GO:0005515
Rops9g02261 460 Gene3D - 80 187 IPR015943 GO:0005515
Rops9g02261 460 SUPERFAMILY WD40 repeat-like 100 434 IPR036322 GO:0005515
Rops9g02261 460 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 41 430 IPR045182 -
Rops9g02261 460 PRINTS G protein beta WD-40 repeat signature 229 243 IPR020472 -
Rops9g02261 460 PRINTS G protein beta WD-40 repeat signature 412 426 IPR020472 -
Rops9g02261 460 PRINTS G protein beta WD-40 repeat signature 270 284 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02261 Rops-Chr9 41862645 41864273 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02129 10 38549745 38554688 Rops9g02261 9 41862645 41864273 PCT