Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02259 ATGTTCACTAATTCTCACTCAGTAATGAGAACCTTACTATCACCTTTGTCAGAACCAGACCTCTCCTTAAACATTAGTCCACCTTCTATTTTAGATTCTGAAGCCAAAGAAGTGGGAACCTACAATGGAATGATCAGTAGCAAAGCACTTAATAACGATATATGCTCATCAACCTCTGAATCAGGAAGTAGTGGAAGCGAGTTAAGCCATGAGAACGGCTTTTTCCACCATGATCTTAGTCATCGTGAGCCCACATTAAGATTAGGATTTGGAACTCCAGATTTGAATCACCATCATCCAGTTCAAGGAGTCTCGAGAAACTTCAATCACCACATCCAACCTCACATCTATGGCCGTGATTTCAAACGAAATTCAAGAGTCATTAATGGTGCTAAAAGAAGCGTTAGAGCTCCTAGGATGAGATGGACCACAACCCTCCATGCCCATTTTGTTCATGCGGTTCAGCTTCTAGGTGGTCATGAAAGGGCAACTCCGAAATCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACAGTTGCAGGTCATGGGCAGACAGATATTGGCTTGAGTCGAAGGTCAGGGATTGTTCATCTTAATGGACCCTCCTCAGTTTGTGAAAGACCCAATTTACCTCAAAAATCACACAGGGCATCGTGGCAATCATCAATAGAGACAAATATAAACAATTGTGGACGAAAATCCGAAATGGGTTTGATGTATTCTAATCTCAAGGGAAATAATACCAATGTGAATGAGATGAATTATGGAGGCCTGTCAAATAGCATGAGGGAGAGATTGGATTCTACCCCTTTGTCACGTTCCGAGACCATGATTGACCTAGAATTTACCCTTGGAAGGCCAAATTGGAATAATGATCATCATGCAGAATCATCAAGAGAGTTAACTCTTCTCAAGTGTTAA 984 0.4146 MFTNSHSVMRTLLSPLSEPDLSLNISPPSILDSEAKEVGTYNGMISSKALNNDICSSTSESGSSGSELSHENGFFHHDLSHREPTLRLGFGTPDLNHHHPVQGVSRNFNHHIQPHIYGRDFKRNSRVINGAKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTVAGHGQTDIGLSRRSGIVHLNGPSSVCERPNLPQKSHRASWQSSIETNINNCGRKSEMGLMYSNLKGNNTNVNEMNYGGLSNSMRERLDSTPLSRSETMIDLEFTLGRPNWNNDHHAESSRELTLLKC* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02259 327 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 19 315 IPR044847 GO:0000976|GO:0006355|GO:0010158
Rops9g02259 327 FunFam Myb family transcription factor 136 194 - -
Rops9g02259 327 NCBIfam myb-like DNA-binding domain, SHAQKYF class 138 191 IPR006447 GO:0003677
Rops9g02259 327 SUPERFAMILY Homeodomain-like 135 192 IPR009057 -
Rops9g02259 327 Pfam Myb-like DNA-binding domain 139 190 IPR001005 -
Rops9g02259 327 Gene3D - 137 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02259 Rops-Chr9 41770623 41774214 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops9g02259 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02259 9 41770623 41774214 Rops9g02259 9 41770623 41774214 ECH