Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02253 ATGGCCCTGAACGATTTCTTCGCCGGCGAGATTGCAACGGAGCTTCTGAAAATGCTTTACAGCATTTGTAGAAAGTCCCTTTTATGCAGAACAAGCGCTGAACAACTCATAATCTATATCAATGAACTTCTCCCCACAATTGAAGAAATCAAATACTCCGGCGTCGAACTTCCGGCGATGCGCCAGTCACAGCTCGATCGTTTATCGGAGATACTTCGCTCCGGCGTGGAGCTTTCACACAAGGTACTCTCTTCAAGCCGTTGGAACGTGTACAAGAACTTGCAACTTGCAAAGAAGATGGAGAAGCTTGAGAAGAATGTTTCAAGGTTCATGCAGGGTCCCATGCAGGCTCATATATTGGCTGATGTGCATCACACCCGGTTCGAGATGGCAGAGCGGTTCGACCGGGTTGAAGCATCGAACCGGAGGTTGGAGAAGTACTTTGGTGCCATGAAGATTGGGGTTGGTGGTGGAGGGTGGGTGGAGGAGGCTGTGAGGAGCATGGAGGTTGATGAGACATGGGTTGAGGGTAATAATGGAAATTTGGGTGTGGGTTTGGATTTTGGGAAGAATAAGGTTAAGGAGATGATTGTTGGAAGGAATGATCTTTGGGTTGTTGGAATTTCTGGTATTGGTGGATCAGGGAAGACCACTCTTGCTAGAGAGGTTTGTAGAGATGAACAAGTTCGATGTTATTTCAAAGAGAGAATCTTGTTCCTGACTGTCTCACAATCTCCAAACGTGGAGCAGCTAAGGACAAAGATTTGGGGGTATATTATGGGAAATGAAAGTTTGAATCCAAATTATGCGGTTCCACAGTGGATGCCACAATTTGAATGCAGAAGTGAAACTCGAACTTTGATTGTTCTGGATGATGTTTGGTCACTCTCTGTGCTTGAGCAGCTTGTATGTAGAATACCTGGTTGCAAATTTGTTGTGGTGTCTAGATTCAAATTCCCAACAATATTGAATGCCACTTATGCAGTGGAATTGCTAAGTGAAGAGGATGCTTTGTCTTTGTTTTGTCATCATGCTTTTGGACAGAAATCAATCCCTTTAGATGTAAATGAGAATCTGGTCAAGCAGGTTGTGAGTGAGTGTGAAAGGCTTCCACTTGCTCTTAAAGTGATTGGAGCTTCTTTGAGAGATCAGACTGAAATGTTTTGGGAAGGTGTTAAAAACAGGCTATCTCAAGGTCTAAGTATTGGGGAATCCCATGAAATCAATCTGATTGAAAGAATGGCAATTAGTATCAATTACCTATCAGAAGAAAAGTTCAAGGATTGCTTCTTGGACCTGTGTTCATTTCCAGAGGATAAAAAAATTCCTCTAGATGTTCTCATCAATATGTGGGTTGAAATCCATGATATTGATGAAAAGGATGCTTTTGCCATAGTTGTTGAGCTCTCAAACAAAAATCTTCTCACCTTGGTGAAAGAAGCACGTGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTCAGTTACCCAACATGATGTACTAAGAGACCTTGCTCTTAATTTGAGCAATCGTGCAAGTATTAATGAACGTAGGCGATTAGTTATGCCAAAACGAGAAAATGGACTCCCCAAAGAGTGGTTGAGATACAAGCACAGACCATTTGAGGCTCAAATTGTTTCAATTCACACAGGTGAAATGAAAGAAATGGACTGGTGTAAACTAGAATTTCCTAAGGCTGAAGTGCTGATTATTAATTTCACATCCAGTGAATACTTCTTACCTCCCTTCATTGATAAAATGCCAAATTTGAGGTCATTAATAGTTATAAACTACAGTGCATCATATGCTTGCCTTCATAATGTTTCAGTTTTTAAGGATTTGACCAACTTGAGAAGCCTTTGGCTTGAAAAAGTTTCCATCCCTCGGTTACCAGGCATTGTCATCGAAAGCTTGGGCAAATTATTTATAGTCCTATGTAAGATTAATAACAATTTGGAGGGGAAAGAGACAGACCTGACACAAATCTTCCCTAACCTCTCTGAGCTCACTCTTGATCATTGTGATGATGTAACTGAGTTGCCCTCAAGCATTTGTGGATTACAATCACTTCAGAATTTGAGTCTCACAAACTGCCACAATTTGACTCAACTTCCTGTTGAATTGGGGAAACTAAGATTTCTAGAGATCCTTCGGTTATATGCTTGTCCAGAACTGAAAACACTTCCTCCTAGCATCTGTGAGTTGACCAAGTTGAAGTACATTGACATTTCTCAATGTGTTAACTTGGCATGCTTCCCTGAAGAGATTGGTAAATTAGTAAGCTTGGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGAATGTACCAAAGTCTGCAATTTCATTGCAGTTTTTGCGGCTAGTAATCTGTGATGAGGAGGTATCTAGTATTTGGAAAGATGTTCAGAAGGCCAAGCCAAGTGTCCATATTCAAGTATCAGAGCAGTACTTTGATTTGGACTGGCTTAAAGAGTGA 2478 0.4136 MALNDFFAGEIATELLKMLYSICRKSLLCRTSAEQLIIYINELLPTIEEIKYSGVELPAMRQSQLDRLSEILRSGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFMQGPMQAHILADVHHTRFEMAERFDRVEASNRRLEKYFGAMKIGVGGGGWVEEAVRSMEVDETWVEGNNGNLGVGLDFGKNKVKEMIVGRNDLWVVGISGIGGSGKTTLAREVCRDEQVRCYFKERILFLTVSQSPNVEQLRTKIWGYIMGNESLNPNYAVPQWMPQFECRSETRTLIVLDDVWSLSVLEQLVCRIPGCKFVVVSRFKFPTILNATYAVELLSEEDALSLFCHHAFGQKSIPLDVNENLVKQVVSECERLPLALKVIGASLRDQTEMFWEGVKNRLSQGLSIGESHEINLIERMAISINYLSEEKFKDCFLDLCSFPEDKKIPLDVLINMWVEIHDIDEKDAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLALNLSNRASINERRRLVMPKRENGLPKEWLRYKHRPFEAQIVSIHTGEMKEMDWCKLEFPKAEVLIINFTSSEYFLPPFIDKMPNLRSLIVINYSASYACLHNVSVFKDLTNLRSLWLEKVSIPRLPGIVIESLGKLFIVLCKINNNLEGKETDLTQIFPNLSELTLDHCDDVTELPSSICGLQSLQNLSLTNCHNLTQLPVELGKLRFLEILRLYACPELKTLPPSICELTKLKYIDISQCVNLACFPEEIGKLVSLEKIDMRECPMIRNVPKSAISLQFLRLVICDEEVSSIWKDVQKAKPSVHIQVSEQYFDLDWLKE* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02253 825 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Rops9g02253 825 Gene3D - 181 321 IPR027417 -
Rops9g02253 825 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Rops9g02253 825 Gene3D - 415 504 IPR036388 -
Rops9g02253 825 Gene3D Ribonuclease Inhibitor 546 809 IPR032675 -
Rops9g02253 825 Pfam NB-ARC domain 191 411 IPR002182 GO:0043531
Rops9g02253 825 SUPERFAMILY L domain-like 567 788 - -
Rops9g02253 825 PRINTS Disease resistance protein signature 280 294 - -
Rops9g02253 825 PRINTS Disease resistance protein signature 733 749 - -
Rops9g02253 825 PRINTS Disease resistance protein signature 367 381 - -
Rops9g02253 825 PRINTS Disease resistance protein signature 205 220 - -
Rops9g02253 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 433 IPR027417 -
Rops9g02253 825 Gene3D - 331 414 IPR042197 -
Rops9g02253 825 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 823 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02253 Rops-Chr9 41675856 41679353 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02253 9 41675856 41679353 Rops9g02253 9 41675856 41679353 ECH