Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02240 ATGGAGAGGAGAACTAAGTCATGCATTGCACAAATTCAGGCCCCAACTTATGGAAACTTGGTAACCATTCTCAGCATTGATGGGGGTGGTATTAGGGGCATCATCCCTGCCACAATTATTGCTTTCCTTGAATCGCAGCTTCAGGAGTTGGATGGTGCAGATGCAAGACTTGCAGACTACTTTGATGTGATATCAGGAACAAGCACAGGAGGTCTTGTAACAGCTATGTTAACTGCTCCAGACAAAAACGATCGTCCACTCTTCGCTGCCAAAGATATCAAGTCCTTTTACTTGAACCACTGCCCAAAAATTTTCCCACAATACAGGGGCCTCAGTGGGACGATATTAGCAAAGATAATAAGATCTCTGGGAGGACCCAAATATGATGGGAAATATCTCCATGAGGTCGTCAAAGAGAAACTTGGAGACATTCGCTTACATGAAACCATCACCAACGTTGTCATCCCCACCTTTGATATCAAGTGTTTGCAACCAATTATTTTCTCATCTTATCAGATTAAGAAAACCCCTTGCATGGATGCTAAACTTGCTGACATATGCATCAGCACTTCCGCTGCACCTACTTATCTCCCTGCTCACAACTTCAACAACCAAGATTCAAAAGGGAACGTTCATGAATTCAACCTTATTGATGGTGGTGTTTGTGCAAATAACCCGGCTTTAGTTGCAATGAACGAAGTAACAAAGCAGATCATTAATGATAATTCTGATTTCTTTCCAATCAAGCCTCTCGAATATAGTCGCTTTCTAATAATTTCAATAGGCACTGGGACAGCAAAAAATGAAGAAAAATTCAATGCAAAAATGGCAGCCAAATGGGGACTACTGGATTGGCTAACCCACAGTGGGTGTACTCCCTTAATTGATGTTTTTACTCAATCAAGTGATGATATGGTGGATTTTCATTTATCCACTGTCACTCAAGCTCTTAATTCGGAAAATAACTACCTTCGCATACAGGATGACACGTTGACCGGAACAGATTCTTCTGTTGACATTGCTACAAAGGAGAACTTGGAGAAACTGTGTCAAATTGGTGAAAAGTTATTATTGAAACCAGTCTCTAGGATCAATTTAGAAAATGGTCACTTTCAACCACTGGAAAATGGAGAAACCAATGAAGATGCCCTCAGAAGGTTTGCAAAAATACTTTCACAAGAGAGGAGGCTCCGTGAAATGAGATCCCCACACACTAATAAAAAGGCGTTCTAA 1233 0.4096 MERRTKSCIAQIQAPTYGNLVTILSIDGGGIRGIIPATIIAFLESQLQELDGADARLADYFDVISGTSTGGLVTAMLTAPDKNDRPLFAAKDIKSFYLNHCPKIFPQYRGLSGTILAKIIRSLGGPKYDGKYLHEVVKEKLGDIRLHETITNVVIPTFDIKCLQPIIFSSYQIKKTPCMDAKLADICISTSAAPTYLPAHNFNNQDSKGNVHEFNLIDGGVCANNPALVAMNEVTKQIINDNSDFFPIKPLEYSRFLIISIGTGTAKNEEKFNAKMAAKWGLLDWLTHSGCTPLIDVFTQSSDDMVDFHLSTVTQALNSENNYLRIQDDTLTGTDSSVDIATKENLEKLCQIGEKLLLKPVSRINLENGHFQPLENGETNEDALRRFAKILSQERRLREMRSPHTNKKAF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02240 410 Pfam Patatin-like phospholipase 24 231 IPR002641 GO:0006629
Rops9g02240 410 CDD Pat17_isozyme_like 18 369 - -
Rops9g02240 410 FunFam Patatin 13 403 - -
Rops9g02240 410 PANTHER XYLOSE ISOMERASE 8 399 - -
Rops9g02240 410 SUPERFAMILY FabD/lysophospholipase-like 19 369 IPR016035 -
Rops9g02240 410 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 231 IPR002641 GO:0006629
Rops9g02240 410 Gene3D Cytosolic phospholipase A2 catalytic domain 9 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02240 Rops-Chr9 41415713 41419190 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02240 12 404 Miscellaneous Gene Families AT2G26560 65.570 0.0 530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02240 9 41415713 41419190 Rops9g02240 9 41415713 41419190 ECH