Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02229 ATGTCTGCAAGGAATAATGAACACCATTCCGTTCCTCTTTCGGTGCTTTTGAAGCGTGAATTGGCGAATGAGAAAATTGAGAAACCTGAGATTGCTCATGGTCAAGCTGGACAAAGCAAGAAAGGAGAGGATTTCACGCTGCTCAAGACGGAATGCCAGAGGATGGTTGGTGATGGGGTCTCTACATATTCCGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAATAATGTTTTAAGCGCTATTCCTCCAGATCTTAATAGAGATGAGTGGATAGCAGCATTGCCTAGAGCTTTGGTTGCAGGCTTTGTGAAAACTGATAAAGATTTTCAAGAGAAAGCACAAAAATCGGGAACAACTGTCACCTTTGTGATTATTGAAGGATGGGTCGTAACAGTTGCATCAGTCGGTGATTCCCGTTGCGTACTTGAATCTTCTGAAGGTGGGATTTATTACTTGTCAGCAGATCATAGACTAGAAACAAATGAAGAAGAGAGGGTGCGCATCACCTCTAGTGGGGGTGAGGTTGGTCGGCTAAATACAGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCACGATCTATTGGAGATATGGATATCGGTGAATTTATTGTCCCTGTACCGTATGTAAAGCAAGTGAAGTTGTCTAGCACTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATGCTCTACCTGCAGAAGTTGCCCTTGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCTGCACCACATCTTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCGGCATCGTTGTTGATATATTACCTCAGGAGAAGCCAACTGCTAATGTGCCTCAACCAAAGAAGCCAGTAAAAGGAATGCTGAAGTCTATGTTTCGTAAAAAGTCTTCTGAATCATCTTCTTATGACAAAGAATACTTGGAGCCAGATGTAGTAGTGGAACTGTATGAGGAAGGATCTGCCATGCTATCAGAGAGGTTAGATACTAAATATCCTCTCTGCAACATGTTCAAGTTGTTCATGTGTGCAGTATGTCAAGTAGAGATAAAACCTGGAGAGGGTATTTCAATACATGAGGGTGCTTCCAACCCTCGAAAATTGCGTCCCTGGGATGGACCTTTCCTTTGCCCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATCAGATAGACTTAGCAGCGGAAGTGATGAATAA 1287 0.439 MSARNNEHHSVPLSVLLKRELANEKIEKPEIAHGQAGQSKKGEDFTLLKTECQRMVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKAQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSSTGGRLVICSDGVWDALPAEVALDCCRGMSAEAAAPHLVKEAVQAKGLRDDTTGIVVDILPQEKPTANVPQPKKPVKGMLKSMFRKKSSESSSYDKEYLEPDVVVELYEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEIKPGEGISIHEGASNPRKLRPWDGPFLCPSCQEKKEAMEGKRSSDRLSSGSDE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02229 428 Pfam Protein phosphatase 2C 43 278 IPR001932 -
Rops9g02229 428 CDD PP2Cc 37 294 IPR001932 -
Rops9g02229 428 Gene3D - 32 303 IPR036457 -
Rops9g02229 428 MobiDBLite consensus disorder prediction 409 428 - -
Rops9g02229 428 SMART PP2C_4 22 292 IPR001932 -
Rops9g02229 428 FunFam probable protein phosphatase 2C 12 33 300 - -
Rops9g02229 428 SUPERFAMILY PP2C-like 35 294 IPR036457 -
Rops9g02229 428 SMART PP2C_SIG_2 47 294 IPR001932 -
Rops9g02229 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 294 IPR001932 -
Rops9g02229 428 PANTHER PROTEIN PHOSPHATASE 38 293 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02229 Rops-Chr9 41219701 41225367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02229 7 427 PP2C-type Phosphatase Gene Family AT1G47380 81.087 0.0 717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02229 9 41219701 41225367 Rops9g02229 9 41219701 41225367 ECH
Rops9g02229 9 41219701 41225367 Rops8g02692 8 60960382 60963600 PCT