Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02225 ATGAAAGTTTCAAGCCTTCAAAAGTTGGTGAAGACAGCACCATCTAAAGCTTTGGTTATCAGAATCAATTTGGTTGTTCTTGCTGTCTTTCTGGTTGTTTATGCAACCCTTCTTCTCCGTCCATCTTCTTCAGTTTATTTCGAAAATGCAGCTTCCCTTGTTAGGTGCTCCTTCAGTGAATGTCATCACAAGGCAGAACAAGGCATAAAAATGAAAGTAGTATTGGAGGAATTACCTCAAGTGAAATCAAGTAGGCCAAAGAAGAATGCAACTAAGATAGAGGTGCCTAGCTTCTTTGGTGAAATGAGGAAAGGAATGAAGATTGGAATGGTGAACATGCAAGATGATGATGTGAGTGAATGGAACTCACATGGAGAAACAAAACATGTTTATTTTGAGAGGGTATCAGAGTTTTTCAATTGGACAGATTTATTTCCTGAATGGATAGATGAGGAGGAAGAGAGTGATGTCCCATCATGCCCTGAGATACCTATGCCAGAGTTTGAAGCATATGAAAAAATGGACATAATAGTGGCAAAGTTGCCATGCAAGTATCCTGAAGAAAGGTGGGGGAGGGATGTTTTCAGGTTACAAGTTCATCTTATTGTGGCAAATATGGCAGTGAAGAAGGGGAAGAAGGATTGGAAATGGAAGACCAAAGTGGTTTTTTGGAGCAAGTGTAGACCAATGTTGGAGCTGTTTAGATGCAATGACTTGGTTAAGCAGGAAGGTGATTGGTGGTATTATGAGCCAGATGTTAAGAAATTGGATCAGAAGGTTTCATTGCCTGTTGGGTCCTGCCTTTTGGCTTTGCCTCTATGGGAACCAGGGATCGACAAGGTATACGACATGTCAAAGATGGAACGCAACGTGAGAAGCAAAACAAGAGCAAAACGCGAAGCATACGCAACAGTGGTCCACTCCTCCGAAAGCTACGTTTGCGGCGCAATCACGTTAGCACAGAGCCTCCTCCAAACAGGAACCAAACGCGACCTTATCCTCCTCCTCGACAACTCAATCTCCACCCGAAAACGCCTCGCACTCTCCGCCGCCGGCTGGAAGATCCGAACCATAACCCGAATCCGAAACCCGAAAGCCGAAAACGGAACCTACAATGAATACAACTACAGCAAGTTCCGCTTATGGCAACTCACCGATTACGACAAAGTCATCTTCATAGACTCCGACATCATCGTACTCCGAAACCTCGACATTCTCTTCAACTTCCCTCAAATGTCGGCCACGGGAAACGACCAATCAATCTTCAACTCCGGGATCATGGTTCTCGAACCTTCAAATTGCACCTTCAACGTTCTCATGAGTCGTCGTTACGACGTCGTTTCATACAACGGTGGGGACCAAGGTTTTCTCAACGAGATCTTCGTGTGGTGGCATAGGTTACCGAGAAGAATTAATTTTTTGAAGAATTTTTGGGCTAATACAACGTTGGAGGCAAGTGTGAAAAATGGGTTGTTTGCTGCTGATCCACCGAAGCTTTATGCTATTCATTATCTTGGTTTGAAGCCTTGGCATTGTTATAGGGATTATGATTGTAATTGGGATGTTCAGGATCAAAGGGTTTATGCGAGTGACGTGGCGCATCGAAGGTGGTGGAAGCTTCATGATGGAATGAATAAGAGGTTGCAGAGTTTTTGTAGATTAACGAGGAAAAGGAGAACAGAGTTGAACTGGGAAAGGAGAAGAGCTAGTAAGTTGGGGTTACCGGATCACCATTGGAAGATTAATATCACGGATCCTAGAAGAGCTGGTTCTCTTTTGATGGACTAG 1788 0.4385 MKVSSLQKLVKTAPSKALVIRINLVVLAVFLVVYATLLLRPSSSVYFENAASLVRCSFSECHHKAEQGIKMKVVLEELPQVKSSRPKKNATKIEVPSFFGEMRKGMKIGMVNMQDDDVSEWNSHGETKHVYFERVSEFFNWTDLFPEWIDEEEESDVPSCPEIPMPEFEAYEKMDIIVAKLPCKYPEERWGRDVFRLQVHLIVANMAVKKGKKDWKWKTKVVFWSKCRPMLELFRCNDLVKQEGDWWYYEPDVKKLDQKVSLPVGSCLLALPLWEPGIDKVYDMSKMERNVRSKTRAKREAYATVVHSSESYVCGAITLAQSLLQTGTKRDLILLLDNSISTRKRLALSAAGWKIRTITRIRNPKAENGTYNEYNYSKFRLWQLTDYDKVIFIDSDIIVLRNLDILFNFPQMSATGNDQSIFNSGIMVLEPSNCTFNVLMSRRYDVVSYNGGDQGFLNEIFVWWHRLPRRINFLKNFWANTTLEASVKNGLFAADPPKLYAIHYLGLKPWHCYRDYDCNWDVQDQRVYASDVAHRRWWKLHDGMNKRLQSFCRLTRKRRTELNWERRRASKLGLPDHHWKINITDPRRAGSLLMD* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02225 595 CDD GT8_Glycogenin 300 544 - -
Rops9g02225 595 PANTHER GLYCOGENIN SUBFAMILY MEMBER 192 589 - -
Rops9g02225 595 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 298 548 IPR029044 -
Rops9g02225 595 SUPERFAMILY Nucleotide-diphospho-sugar transferases 300 548 IPR029044 -
Rops9g02225 595 FunFam Hexosyltransferase 297 548 - -
Rops9g02225 595 Pfam Glycosyl transferase family 8 306 511 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02225 Rops-Chr9 40741505 40745784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02225 89 594 Glycosyltransferase AT4G33330 69.863 0.0 763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02225 9 40741505 40745784 Rops9g02225 9 40741505 40745784 ECH