Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02220 ATGGATGGAACTTTCGCTTACATTGTTGTCTTTCTTCTTACCTTATTCTCATTCATGTTCTTACTAAAACGAAATAGAAGACCCCAGAACCAAACAAGAGCAAAGCTTCCTCCAGGTTCAATGGGGTGGCCTTACTTAGGACAAACCCTTCAACTCTACTCCCAAGACCCAAATGTTTTCTTTATCACCAAACAAAAAAGGTACGGTGAAATATTCAAGACCAACATCCTTGGTTGTCCCTGTGTGATGTTGGCAAGTCCTGAAGCTGCACGGTTTGTGTTGGTGACACAAGCTCACTTGTTCAAACCAACATACCCCAAAAGCAAGGAACGTTTGATTGGTCCTTCAGCTCTGTTTTTCCACCAAGGAGAGTACCACTTGCGTTTGAGGAAGCTAGTTCAGAGGTCCCTTTCCCTTGAATCACTTCGCAACTTGGTTCCTGATATTGAAGCCTTAGTTGTATCTTCCATGAAATCTTGGGGTGATGGAGAAGTCATTAACACTTTTAAGGAAATGAAAAGAATTTCTTTTGAAGTTGGTATCCTCAAAATTCTAGGCCATCTTGAGCCACGGTTGAGGGAGGAGCTGAAGAAGAATTACCGGATCGTGGACACTGGTTATAATTCATTTCCAACTCGAATCCCAGGAACACAATACAAAAAGGCACTGTTGGCTAGAAAGAGGCTTGGAAAGATTCTAAGTGAAATAATTTGTGAGAGGAGGGAGGAGAAGTTGATTGATAGAGATCTCTTGAGTTGCTTATTGAATTGGAAAGGTGAAGGAGAAATGTTATCTGATGACCAAATTGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCAAGATACCACAGCTACTGTCATGACATGGGTGGTAAAGTACTTGCATGATGAACCGAAACTTCTCGAGTCTGTAAAGGCTGAGCAGATGGCAATTCACAAGGCAAATGAAGGTAATCTACCGCTGAGTTGGAATCACACTAGAAACATGCCAATTACCTACAAGGTTGTGTTAGAGAGCTTAAGAATGGCAAGCATTATATCATTCCCTTTTAGAGAAGCAGTCGCTGATGTAGTGTACAAGGGGTTCCTAATACCAAAAGGGTGGAAAGCAATGCCTCTGTTCAGAAATATTCATCACAACCCAGAATATTTTCCAGAGCCTCAGAAATTCAACCCTTCAAGATTTGAGGTCGCACCGAAACCCAATACTTTCATGCCATTTGGTAGTGGAGTACACGCTTGCCCCGGCAATGAGCTTGCCAAGCTGGAGACACTGATTATGATCCATCATTTGGTAACCAAGTTTAGGTGGGAACTAGTAGGATCACAATGTGGGATTCAGTATGGCCCATTTCCATTGCCTCTGAATGGACTCCCTGCTAGATGTTGGAGAGAAGCTCCCAGCAGCTAG 1413 0.4275 MDGTFAYIVVFLLTLFSFMFLLKRNRRPQNQTRAKLPPGSMGWPYLGQTLQLYSQDPNVFFITKQKRYGEIFKTNILGCPCVMLASPEAARFVLVTQAHLFKPTYPKSKERLIGPSALFFHQGEYHLRLRKLVQRSLSLESLRNLVPDIEALVVSSMKSWGDGEVINTFKEMKRISFEVGILKILGHLEPRLREELKKNYRIVDTGYNSFPTRIPGTQYKKALLARKRLGKILSEIICERREEKLIDRDLLSCLLNWKGEGEMLSDDQIADNIIGVLFAAQDTTATVMTWVVKYLHDEPKLLESVKAEQMAIHKANEGNLPLSWNHTRNMPITYKVVLESLRMASIISFPFREAVADVVYKGFLIPKGWKAMPLFRNIHHNPEYFPEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRWELVGSQCGIQYGPFPLPLNGLPARCWREAPSS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02220 470 CDD CYP90-like 65 462 - -
Rops9g02220 470 PANTHER CYTOCHROME P450 26 34 451 - -
Rops9g02220 470 SUPERFAMILY Cytochrome P450 31 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Rops9g02220 470 FunFam Abscisic acid 8 26 465 - -
Rops9g02220 470 Gene3D Cytochrome P450 25 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02220 470 Pfam Cytochrome P450 37 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02220 Rops-Chr9 40691359 40694785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02220 7 467 Cytochrome P450 AT3G19270 66.523 0.0 650
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02220 9 40691359 40694785 Rops9g02220 9 40691359 40694785 ECH