Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02213 ATGTCAAAGTTAATTGATGTTTGCAATATTCAAGGATTTGTGTATGAGATTATTCTTGAGCAAGGGAAGCCGATAATTGGTGCTTTTGAAAATCCTCACCTATTGTGGAAGGAAAAGGTCAAGTTTGATTGTAATGCTCCTGCAGCAATAGCCAATTATGAAGCTGGGGATGGATTAAACATTACTCACACTTTGCATGAACTTCAAGACATTGCTCTTTGGTCATTTCTGTCAATTCTAATGCACAGTTGTGATCCACCCCTAGGATGGTTCTTTTTCGAGGGTGGTATTCTTCCACCATTGTGGCCAAAAGGAAATGAAGAATGGTGGCCTTAA 336 0.3929 MSKLIDVCNIQGFVYEIILEQGKPIIGAFENPHLLWKEKVKFDCNAPAAIANYEAGDGLNITHTLHELQDIALWSFLSILMHSCDPPLGWFFFEGGILPPLWPKGNEEWWP* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02213 111 SUPERFAMILY DNA-binding domain of EIN3-like 62 111 IPR023278 GO:0003700|GO:0005634
Rops9g02213 111 Gene3D - 60 111 IPR023278 GO:0003700|GO:0005634
Rops9g02213 111 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 111 IPR006957 GO:0003700|GO:0005634
Rops9g02213 111 Pfam Ethylene insensitive 3 1 110 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02213 Rops-Chr9 40551290 40551625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02213 1 111 EIL Transcription Factor Family AT2G27050 50.407 5.65e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops9g02213 EIN3 2.8e-36 No_clan