Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02193 ATGATGGCTTCGAATATTCTGAATTTCCTGAACAATACCTTAGATTGGGTGACATATGCATTAGATGTTCCTTCTGCGCGAGCTGTAGTTTTCGGAGTTCATATCGGTGGACATTTGTTTCTCGAAGTTTTTCTACTGGTGGTCATACTTTTCTTGCTTTCCCAGAAAAGTTACAAGCCTCCTAAAAGACCATTAACAAACAAGGAAATTGATGAGCTATGTGATGAATGGGTTCCCGAATCCCTTATTCCTTCTCTCAATGAGGAGACGCTGTATGAACCACCAGTGCTGGAGAGTGCTGCTGGGCCACATACCATAATTAATGGTAAAGAAGTTGTCAATTTTGCTTCAGCAAACTATCTTGGGTTCATAGGTCATAAAAAGTTACTTGATTCATGTTCTTCTGCTATAGAGAAATACGGTGTTGGTTCTTGTGGGCCCCGTGGGTTTTATGGAACAATTGATGTCCATCTTGACTGTGAAGCGAGAATAGCAAAATTTTTAGGGACCCCTGATTCAATTCTCTACTCTTACGGACTTTCCACCATGTTCAGTGCAATTCCTGCTTTCTCTAAAAAAGGAGATATAATTGTGGCGGATGAGGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTTTCTAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGGACTCTTTAAGAGAAACTCTAGAGAACATTACTTCCAAAAATAAGAGGATCAAGAAATTGAGGCGTTATATTGTTGTTGAAGCTGTCTACCAGAATTCTGGCCAAATAACACCCTTAGATGAGATCATTAAATTGAAGGAAAAATATCGATTTCGTGTTTTGCTGGATGAGAGCAACTCATTTGGTGTGCTTGGAAGTACTGGAAGAGGTCTCACTGAATACTATGGAGTTCAAGTTGAGAAGTTAGATATTATAACTGCTGCTATGGGACACGCATTGGCCACAGAAGGAGGATTCTGTACTGGAAGTACAAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGGTACGTCTTTTCTGCTTCTTTGCCCCCATATCTTGCAAGCGCTGCAATTACGGCTATTGATGTCCTGGAGGAAAATCCCAATCTGACAACGAAGCTGAAGAACAACATTGCTGTGTTATGGAAAGGATTGTCGAAAATACCAGGCTTCACAATTGCAAGTCATCCAGAGTCACCAATTGTTTATTTGAGATTAGAGAAGTCCACAGGTTCCACGAAAGAGGATCTACAACTGCTTGAAAATATTGCTGAACGGGTTTTGAAAGAAGATTCTGTATTTGTGGTGACTTCCAAAAGATCATTATTGGACAAATGCCGTTTGCCTGTAGGAATTAGATTGTTTGTTTCTGCAGGGCATTCAGAGTCTGATATTCACAAGGCATCTGAAGCATTGAAAAGGGTTGCTGCATTAGTCCTCGTTGAGTTCAGGAAGAGGTACAGGATCAAAGTTAGAGTTGTGGATGAGACAAATTGTGCAACATTTGTAATATGGGACAAAGATGGTTGTGCTATTTTAAAGAAATCTTGCTCTGATTTGTTGGATTCAATCCAAAATACTGACAGGGCAGTTGGATTTCTCCAAGTGATAAATCTCTTACTTTGGAAATTAAGGAAGGAGAATCGTTTGTTGCAAAGGATCTAG 1665 0.4018 MMASNILNFLNNTLDWVTYALDVPSARAVVFGVHIGGHLFLEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPESLIPSLNEETLYEPPVLESAAGPHTIINGKEVVNFASANYLGFIGHKKLLDSCSSAIEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLENITSKNKRIKKLRRYIVVEAVYQNSGQITPLDEIIKLKEKYRFRVLLDESNSFGVLGSTGRGLTEYYGVQVEKLDIITAAMGHALATEGGFCTGSTRVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPNLTTKLKNNIAVLWKGLSKIPGFTIASHPESPIVYLRLEKSTGSTKEDLQLLENIAERVLKEDSVFVVTSKRSLLDKCRLPVGIRLFVSAGHSESDIHKASEALKRVAALVLVEFRKRYRIKVRVVDETNCATFVIWDKDGCAILKKSCSDLLDSIQNTDRAVGFLQVINLLLWKLRKENRLLQRI* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02193 554 Pfam Aminotransferase class I and II 111 472 IPR004839 GO:0009058|GO:0030170
Rops9g02193 554 FunFam serine palmitoyltransferase 1 isoform X1 126 367 - -
Rops9g02193 554 SUPERFAMILY PLP-dependent transferases 84 476 IPR015424 -
Rops9g02193 554 Coils Coil 226 246 - -
Rops9g02193 554 Gene3D - 478 546 IPR012340 -
Rops9g02193 554 Gene3D - 126 367 IPR015421 GO:0003824
Rops9g02193 554 Gene3D Aspartate Aminotransferase, domain 1 105 472 IPR015422 GO:0003824
Rops9g02193 554 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 37 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02193 Rops-Chr9 40158805 40173793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02193 2 336 Acyl Lipid Metabolism Gene Families AT4G36480 76.716 0.0 554