Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02189 ATGAGTAGCAACCTTGGAAAATTGTTGGTCTCAACTTTGTACCTCTTCTTGATGTTCCTTCCTATTCACATGTCAGCACATGACACTAACAGAGACACAAAAACTTTCATCAGTGGCCACAGGAACAAAGGTGGTGGTGTAGATGGAAGCTCAAGCAAAGGCTGCAAAAAGAACAACCAATTGGAGAAAAAACTATTGGCATCATCACCATGTCAAAAATCAATAGCCATTCAAGCAGCTCCAACTTCACCTCTCAAAACAGATGCCCTTGTATTTGCAGACACAAGACTTGAAGTAGTGTACCCAGTGATCCAAAAATTCAAGTCCATCATCACCTCAGATCCACTAGGAGTTACCAAAACTTGGGTAGGTTCAGATATATGCAGCTATAAAGGATTCTATTGTGATAGCCCACCAGATAACAACTCTGCCATTGCTTTAGCCTCCATTGACTTCAATGGATTCCAACTTAGTGCTTCTACCCTTGATGGGTTTATTGATAAGCTTCCTGATATTGCTCTCTTCCATGCAAATTCCAACAATTTTAGTGGCACAATATCACCCCAAATTGCCAAGTTACCTTATTTTTATGAGCTTGATCTAAGCAACAACCAATTGTCTGGTCCATTTCCCACTGCTGTTCTAGGCATGGGCACATTAACTTTCTTGGATATCAGGTTCAATTTCTTCTCTGGGGCAGTTCCACCACAGATATTCACACAGAATCTTGAAGTCCTCTTCATCAATGACAATATCTTCACTGAGGGGTTGCCTAATAATTTAGACAACACTCATATTCTCTTACTCACCTTAGCAAACAACAAATTCAATGGTCCAATACCTAGAAGCCTTCCCAAAGCTTTGTCTACTCTCACTGAGGTGTTGTTACTTAACAACCAGCTCACAGGTTGTTTGCCTTATGAAATTGGGTTCCTTCAAGAGGCCACAGTGTTTGATGTTGGAAACAACCAGCTCACAGGTCCTTTACCATTCTCTCTGAGTTGCCTTGAAAAGGTTGAGGTGCTCAATTTGGCTGGTAATTTGCTATATGGCATGGTGCCAGAAGTTGTGTGCGCAGGGTTGGAGAATTTGGTCAACTTTTCACTATCTGATAACTATTTTATCCTTGTGGGACCCCTTTGTAGGATCTTAATTGAAAGAGGAGTTCTTGATGTTAGAAACAATTGTATTCCTGGTCTTCCATTCCAGAGATCAGTGGTTGAGTGTGCAACTTTCTTTGCACGTCCAAGGATGTGTCCCTTCATGTGGGCTCATAGTTTCATCCCTTGTAAGCTTCCTTTTCATAACTCCCCGGTTTCTTCCACCATTCCTTAG 1335 0.415 MSSNLGKLLVSTLYLFLMFLPIHMSAHDTNRDTKTFISGHRNKGGGVDGSSSKGCKKNNQLEKKLLASSPCQKSIAIQAAPTSPLKTDALVFADTRLEVVYPVIQKFKSIITSDPLGVTKTWVGSDICSYKGFYCDSPPDNNSAIALASIDFNGFQLSASTLDGFIDKLPDIALFHANSNNFSGTISPQIAKLPYFYELDLSNNQLSGPFPTAVLGMGTLTFLDIRFNFFSGAVPPQIFTQNLEVLFINDNIFTEGLPNNLDNTHILLLTLANNKFNGPIPRSLPKALSTLTEVLLLNNQLTGCLPYEIGFLQEATVFDVGNNQLTGPLPFSLSCLEKVEVLNLAGNLLYGMVPEVVCAGLENLVNFSLSDNYFILVGPLCRILIERGVLDVRNNCIPGLPFQRSVVECATFFARPRMCPFMWAHSFIPCKLPFHNSPVSSTIP* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02189 444 Gene3D Ribonuclease Inhibitor 265 409 IPR032675 -
Rops9g02189 444 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 70 432 - -
Rops9g02189 444 SUPERFAMILY L domain-like 105 397 - -
Rops9g02189 444 Gene3D Ribonuclease Inhibitor 102 264 IPR032675 -
Rops9g02189 444 MobiDBLite consensus disorder prediction 35 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02189 Rops-Chr9 40092858 40094358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02189 89 416 Leucine-rich Repeat extension Gene Families AT3G24480 43.902 2.96e-86 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02189 9 40092858 40094358 Rops9g02189 9 40092858 40094358 ECH