Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02183 ATGGGCCAGGCAGCTTCCACGGCCGCCGTCGTTTGCCGCCGCGAAAGCGCACAAGGCAACCGCTCCGGGAACGCCTCAAAGACCAGATCCACCGCGTTGGTTTCTCCGATGCTCGTTGGAGAAGACGATGACGAGAACAACAGTCGCGGAGAGACGGTTGTGAATGGAACCTCCGATTATATTTCCGATCTACCTGACGAGTGCTTGGCTTCTGTGTTTCAGTCGCTTAGCTCCGCCGATCGAAACCGGTGCTCGCTCGTTTGCCGGCGGTGGCTTCAGGTTGAAGGACAGAGCCGTCACCGGCTTTCGCTCAACGCGCAATCGGATCTGCTTCCGGTAATTTCTTCACTTTTCTCTCGATTCGATTCAGTGACGAAACTCGCTCTCAAATGCGATCGTAGATCCGTGAGTATCAGGGACGACGCGCTCGTTTTGATCTCCGAGCGGTGCCCTAATCTCACGCGCCTGAAGCTACGGGCGTGTCGTGAACTCACCGATGCTGGAATGGAAGCGTTCGCGAAGAATTGCAAGGGTTTGAAGAAGCTCTCGTGCGGATCTTGCACTTTCGGATCCAAAGGAATGAACGCGGTGCTCGATAATTGCGCATCGCTCGAAGAACTCTCCGTCAAGCGCCTCCGTGGAATCACCGACGCGGCGGCGGCGGAGCCGATTGGTCCCGGGGTTGCGGCGGCGTCTTTGAAAACCGTTTGCTTGAAGGAACTTTACAACGGACAGTGTTTCGGTTCATTGATTGTCGGAGCGAAGAATCTGAGAACTTTAAAGCTTTTCCGTTGTTCCGGTGATTGGGATAAGCTATTTCAACTCGTGGCAGATCGAGTTACCAACTCTATGGTTGAGGTTCACCTTGAAAGGCTTCAGATTAGTGATGTTGGTTTGCAAGCTATTGCTAATTATTCAAACTTGGAAATTTTGCATCTTGTTAAGACACCAGAATGCACAGATTTGGGACTTGTTGCAATTGCAGAGAGATGTAAGCTATTGAGGAAGCTTCATGTTGATGGTTGGAAGGCAAATCGTATTGGTGATGAAGGGTTAATAGCGGTTGCAAAGTGTTGCCCTAATTTGCAAGAACTAGTGCTTATTGGGGTTAACCCTACTAAAGCTAGTTTGGAAATGTTGGCATCTAATTGTTCGAATCTAGAGAGGTTGGCTTTGTGTGGAAGTGATACGGTTGGTGATCCTGAGATATCTTGCATTGCTGCAAAGTGTATAGCTTTGAAGAAACTATGCATTAAGAGTTGTCCTGTTTCTGATCATGGGATGGAAGCTTTGGCAAGTGGGTGTCCCAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAGGGTGTTACTTCTGAGGGTGGGGATTGGTTGAGGCTCACTAGGGGGTCAATTGCTGTGAATTTAGATACTGGTGAAGCTGAACATCAGGATGCAAGTGCAAGTGATGGTGGAGCACAAGAAAATGGTATAGAATTTCCTCCAATGCCTGGTCAAACAGCTGCATCTGCATCTGCATCTTCTAATATTGCATCAAGCAGTACTGGTCGATCTAGTTCATTCAAGTCAAGGTTAGGACTTTTGTCTGGGAGGAGTTTAATGGCTAGCACCTTGAGAAGATGGTCAGGTGGTAGCACTAGTGCCCGCCATGGTTAG 1653 0.4894 MGQAASTAAVVCRRESAQGNRSGNASKTRSTALVSPMLVGEDDDENNSRGETVVNGTSDYISDLPDECLASVFQSLSSADRNRCSLVCRRWLQVEGQSRHRLSLNAQSDLLPVISSLFSRFDSVTKLALKCDRRSVSIRDDALVLISERCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCASLEELSVKRLRGITDAAAAEPIGPGVAAASLKTVCLKELYNGQCFGSLIVGAKNLRTLKLFRCSGDWDKLFQLVADRVTNSMVEVHLERLQISDVGLQAIANYSNLEILHLVKTPECTDLGLVAIAERCKLLRKLHVDGWKANRIGDEGLIAVAKCCPNLQELVLIGVNPTKASLEMLASNCSNLERLALCGSDTVGDPEISCIAAKCIALKKLCIKSCPVSDHGMEALASGCPNLVKVKVKKCKGVTSEGGDWLRLTRGSIAVNLDTGEAEHQDASASDGGAQENGIEFPPMPGQTAASASASSNIASSSTGRSSSFKSRLGLLSGRSLMASTLRRWSGGSTSARHG* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02183 550 Gene3D - 60 94 - -
Rops9g02183 550 Gene3D Ribonuclease Inhibitor 95 465 IPR032675 -
Rops9g02183 550 MobiDBLite consensus disorder prediction 499 522 - -
Rops9g02183 550 MobiDBLite consensus disorder prediction 17 33 - -
Rops9g02183 550 SUPERFAMILY RNI-like 109 458 - -
Rops9g02183 550 CDD F-box_AtTIR1-like 61 99 - -
Rops9g02183 550 SMART fbox_2 64 104 IPR001810 GO:0005515
Rops9g02183 550 SMART LRR_CC_2 331 358 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 201 227 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 435 462 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 359 383 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 384 409 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 306 330 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 410 434 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 281 305 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 176 200 IPR006553 -
Rops9g02183 550 SMART LRR_CC_2 150 175 IPR006553 -
Rops9g02183 550 PANTHER UNCHARACTERIZED 62 475 - -
Rops9g02183 550 SUPERFAMILY F-box domain 53 94 IPR036047 GO:0005515
Rops9g02183 550 ProSiteProfiles F-box domain profile. 58 94 IPR001810 GO:0005515
Rops9g02183 550 MobiDBLite consensus disorder prediction 1 51 - -
Rops9g02183 550 FunFam F-box/LRR-repeat protein 3 isoform X1 60 100 - -
Rops9g02183 550 MobiDBLite consensus disorder prediction 472 522 - -
Rops9g02183 550 FunFam F-box protein SKIP2 96 478 - -
Rops9g02183 550 Pfam F-box domain 61 93 IPR001810 GO:0005515
Rops9g02183 550 Pfam Leucine Rich repeat 150 173 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02183 Rops-Chr9 40023067 40025136 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02183 9 40023067 40025136 Rops9g02183 9 40023067 40025136 ECH