Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02175 ATGGCTGACCAAGAGAACTGCTCGCGCCGCCCCCAACGCGAAGCCAAGAAGAGAGCCGCAGCTGCAATATGCGAACAGCGAAAGAAGAGGCGTGTCGCATTAGGGGACCTCACCAACTCTTCCAATGTCGCTACCCCACCGGAGAAAAACCCCGCTTCCGAGATTCACAAGCAGAAAAAGAGAAAGGTCGGAAAACCAACGACGGCGGCGGCGGCGGAGAAGTTGGATGACCCCCAAATGTGTGGGCCCTATGTTTCTGATATTTACGACTACCTTCGCTGGTTGGAGGTGGATCCTAGTAGAAGACCGTTACCTGATTATGTTCAGAAAGTTCAGAAGGATGTTAATGCTAACATGAGGGGTGTTTTAGTGGATTGGTTGGTCGAGGTTGCCGAGGAATATAAACTTGTTTCAGACACGCTTTATTTCTCTGTTTCTTACATTGATAGGTTTCTGTCTTTCAGTGTTCTAACTAGACAGAAGTTGCAATTACTTGGGGTTTCCTCCATGCTCATTGCTTCAAAATACGAGGAGATAAAGCCACCTGATGTGGAGGACTTTTGTTACATTACAGACAACACATACTCTAAGGAAGAGGTTGTGAATATGGAGGCTGATATTTTGAAGTCTTTGAAGTTTGAATTGGGCGGTCCTACGGTGAAAACATTTCTAAGAAGATTCTCTAGAGTTGCTCAAGAGAGTGTTAATACTTCTGACCTGCAATTTGAGTTCCTAAGCTGCTACCTCGCTGAGCTCAGTTTGCTGGATTATAATTGTGTCAAGTTCTTGCCTTCTTTGGTGGCCGCATCTGTTGTGTTTCTAGCAAGATTTATGTTAAGCCCAAAGACACATCCTTGGAATTCAGCACTCCATCAACTCACCAGATATAAACCTGCTGACTTGAAGGAATGCGTTCTAAACATACATGACTTGTATCTCGGTAGGAGAGGGGGTTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGCGTGGCAACAACACCCTCTCCTCCTGAGATACCTCTTTCTTTTTTCGAATTTAGAGGGACAGAACCTTAA 1071 0.45 MADQENCSRRPQREAKKRAAAAICEQRKKRRVALGDLTNSSNVATPPEKNPASEIHKQKKRKVGKPTTAAAAEKLDDPQMCGPYVSDIYDYLRWLEVDPSRRPLPDYVQKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRFLSFSVLTRQKLQLLGVSSMLIASKYEEIKPPDVEDFCYITDNTYSKEEVVNMEADILKSLKFELGGPTVKTFLRRFSRVAQESVNTSDLQFEFLSCYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSPKTHPWNSALHQLTRYKPADLKECVLNIHDLYLGRRGGSLQAVREKYKQHKFKCVATTPSPPEIPLSFFEFRGTEP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02175 356 SMART cyclin_7 222 310 IPR013763 -
Rops9g02175 356 SMART cyclin_7 125 209 IPR013763 -
Rops9g02175 356 Gene3D - 103 216 - -
Rops9g02175 356 MobiDBLite consensus disorder prediction 1 22 - -
Rops9g02175 356 Pfam Cyclin, C-terminal domain 218 340 IPR004367 -
Rops9g02175 356 PANTHER CYCLINS 54 335 IPR039361 -
Rops9g02175 356 SUPERFAMILY Cyclin-like 218 343 IPR036915 -
Rops9g02175 356 FunFam Mitotic cyclin 6 103 203 - -
Rops9g02175 356 Pfam Cyclin, N-terminal domain 87 215 IPR006671 -
Rops9g02175 356 SUPERFAMILY Cyclin-like 76 215 IPR036915 -
Rops9g02175 356 Gene3D - 87 337 - -
Rops9g02175 356 PIRSF Cyclin_A_B_D_E 1 346 IPR046965 GO:0016538|GO:0044772
Rops9g02175 356 CDD CYCLIN_AtCycA-like_rpt2 218 332 - -
Rops9g02175 356 MobiDBLite consensus disorder prediction 34 71 - -
Rops9g02175 356 FunFam Cyclin A1 205 337 - -
Rops9g02175 356 ProSitePatterns Cyclins signature. 120 151 IPR006671 -
Rops9g02175 356 SMART Cyclin_C_2 218 341 IPR004367 -
Rops9g02175 356 CDD CYCLIN_AtCycA_like_rpt1 77 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02175 Rops-Chr9 39782199 39785909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02175 1 350 Core Cell Cycle Gene Families AT5G43080 62.570 2.19e-158 446