Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02153 ATGGCTTCAGTGGAGCAGCCTCTGAAGAAACGAAAGCTCTACGAGCCTTTACCGGAATCGCCACCGTCTCCTCCACCGCCGGAATCGGAAGAAGAAACCGGCGAACCCTCTCCGCAAACCCTACCTCCGCCGTCGACTCCTCCGCTGTCACAGGAGGAAATTCTTGTAAAGCGAAGGAACAAAGACGAAATTCGAAGCGTCTATGAAGGTTACAAAAGGATTAAGTATTGCTTGTTCAAGAAAGATGGTCCTTCAATGACTGAACTTGAACAGAGCTATCTCGCTCTCATCACTTCTTCAAGAGGTTGTATGGGTGTACAAAGAATTGTGGCTGACCTCATTCCTCGATATGCATGTCACTGTCCAACAGCTTTGGAAGCTGCAGCTAAAGTGGTTATTAATATGCATAACTGGAGTTTGGCATTGATCAATAGAGGAGAGGATTCAAGTGGTATTGCATTTGAAACTGCTAGAGCCTGTATTTTTGGTCTGGCTGATGTTTGCTGCATTGCTTCTTCAGTAGCACCAACATCAACTGTCATTAGAGGAATTTGCTCCACAGTTTTTCAAAATGTGCTCAGCTTTTTTATTGTCTTATTCGAGGGAAAGGATGTCTTACAGATGGTTGACAAGAATTTCCTGACCATGCAAGATGCCCCTGAGTTCTTTTCTGAGTTAAAACAAAAGATTTTAGATGAAGATGAATCTTCATTGACTAAATTGTCCAAGTTCCGTGCATTATGTCTACTTCGGATATTCTTCTCTTGTCCGAAAGACTTGCTTGCAGCTTGTTTGGAGTTCTTAGGTTCCGCCACAAAAGAGGGAACTTCTGATGAAGGATGGCGTTTTCTGACCCTGGTGACTAGCATGTTTGATGATGATGAAGCAATTCACCTTTTGGATAGAGCAAATGATGGGCCTAAATCATGTACAGATTCTATTGGGGCAGGCATCAGAGACAATGAGGTTGGCAAGAAAATTATGACCGATGACAACCATGTTTCTAATGGTGATTCATCCGATCGAAAGAGCTGCTTGCTCATGCTGGTTCTTAACAAGGATCCCTCACTGCAGAAATGGATGTTACGTAGATGTAAAAAGTTACTTGACTTGCTTACTAATGCTTCACTGGAAATTACATCAGTACTACAAGGAATTCTTGGAATGTTTGCTCAACAAACAGATTTGGAAGACTGTCAAGTAGATAGTGATGAAGATAAATCTGATTCTTCAATTTACATGAATAGGAACTATGTGGTTCCTAGGATCTCTGAGGAACATGAAAGCATTGATAGATCATCAGGAAAAGCTCATAGCTTTGCAGTGGGTTCACATTTTGACAATGGAGTCTCAAGGCCCATCTGCATTGAGATGGGCGAGGAAAGGAATATGTCCCATCTTAGATGTTCCACACCTAGGGACTCGGTAAACCATCAGAAATTCTCACCTGCAGTTAGAACACCAGTAGACTTTAGGAGTAATTCATTTGAAGGTAGAAATGATTTCCCAGGTGTTGAGAAAAATCAAGTTTTAAATATGAATCTCAATTCACCTCTGTCGAGGTCCTCTAGTGGAGCTGTTAGTAATGTTCTGGCTTCTCCTAATCATCATTTTATGTCACCAACTGCCTCAACAAAAAGTCAAATTGTCTGGTGCTGTGATGGGGATCCTTCAGCCATGGATATTGTCTCTGCTTCTCAGCAGCTATGGGTAGGCTATGTAGGGCCTGATATGCCTGAAAGCCATATTAGGTTTCAGTTAGAGAGGTTTGGTCCGATTGAACAATTTATTTTCTTCCCAGTGAAAGGATTTGCTTTGGTTGAGTACAGAAGGACAATTGATGCAATAAAAGCTCGACACTATTTACCTGGAAATTTTCCTTGCCGTGTAAAATTCATGGATATAGGACTTGGTACTAGGGGTGCAATGAATGGTGTTGCAGTTGGCTCTAGTTGTCATATATATGTTGGAAATATTTCCAGTCAATGGGCCAGGGATGAGATCCTGCATGAATCAAGGAAAGCAATCCATAAGGGTCCTCTCACAGTTATTGATCTTAGCTGTGAGTGTGCAATTCTTATGGAGTTTGAAACTCCTGAAGAAGCTGTCTCTGTCATGTTGCATCTGAGACAGCTCCGAAGAGAAAGAAGTAATTATAACCCACATTTCGGTCCAGGAATTGGGCATGCTTATATGGATGGTGCCAGACCTTTGCCTGCCCATCTTGATCTTAAAGGCACCAACTCTGCTGGGTCACCCCATGCTCGAACTTTACCTGGGAGCCCTGCTGACAGCAGTCGAACAAGGATGTCTCACTTGTGTTCCTTACTTGCTTCATTGCGTACAAAGTATAATATTAATCAGAACATAGGCATCCATGATAACTATATGACTGGAAATAGTTGTGCTTCTTCCATGCGTGAGGAAGATAAAGTGCCATCCAGCATTCTGTGGATAACTATTCCTCGTAGTAGCTCTCTGTTCCTCACAGACGATGAGCTAATGAGCATTTGCAACCTTGCTATTGGCAACTCTGGCTCCATTTTGCGGTTGATGCAAGCAAACATGCAGATGGGTTGTGGTTGGTTTGTCGAATGCAGTAATGTTGATGGTGCGGTCTCTCTTCTAAGGAATCTTCGTGGTTGTCCAGGATTGTTCTTCCAGATAGAATTCAGCAAACCAGGAAGTCAGAATGCTATACCATTTTGTAGTAAACCAGAGAACGATGCTATGGAGCTTGTATCCCCCAGAATAAATGCTGAGAATCATAGTAGTGGAGTCCATGGTGCACCTGTGTCTCAGTCAAACTGGCACTTTACTGATTCCAGGGAGATGTCAGAAGTTGGAGCAAGGAAACCTGATGGTTATGATAATTTGTCAATGGATCCTCATCAAGGAGGTAATGTTCCACATTTATTCTCTGGAACACATGGACCTTCCATTCCACCACCACAACCAATTCAGTCATCTCCTTTCGTTCACCCTGTTTATGTTCCTTCAAATGGCACATGGGATCCACGGGGAATGAATAATCATTTACCCGTCAACCAATTCAAGACAGGAGGAACGCCGAATAATTTTCAGGGTAGTACTGTTCTAAGTCCTTTTATACCTGCTTCAGTAACTCCACTTGCTCAGATACAAGGAACTCCAATGCAGCCACCCTATAACCAGCAGATTCCTCCATCAATTGTACCACCACCTTTATCATCTTTGCCACCTCCTCAGCCAGCAATGCCACCTCCTCTTCCTCCTTCTCCACCACCTCTACCCCAGACACAGCCACCCTTGGTTCCTCCACCACCTGGTTCTCCTCCTCCACCTCCTCCTCCACCACTGCCTGTCCAAGAACCAGTCAATATGGAATGTTCAGGGCAGTCTCTGCAGTATCAGTGGCAGGGGAACCTCTGTAAAAGTGGGGTTAACTATTGTACAATTTATGCATGCAGAGCAGATTCTGATATTTGCAGATATTCAAATGCCATACCTGAGCCTGCCGAATGGCCCACAAAATTAGACATGACTAAACGCACAGATTTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTGATTCCATCTTCCGCATGTGACCACAGAAGGTTTCAGGATTTCATATCATACTTAAAGCAGAGGGATTGTGCTGGCGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGCTGCTATTCATACTCCCCCACTCACTTGAAACATGTTCTTTGCTTTCTATTGCACCTGATCCATCAGATTGCCTCATTGCTTTGGTTCTGCCCAAAGAAACAAACTTTGAGTGGATGTGA 3834 0.4335 MASVEQPLKKRKLYEPLPESPPSPPPPESEEETGEPSPQTLPPPSTPPLSQEEILVKRRNKDEIRSVYEGYKRIKYCLFKKDGPSMTELEQSYLALITSSRGCMGVQRIVADLIPRYACHCPTALEAAAKVVINMHNWSLALINRGEDSSGIAFETARACIFGLADVCCIASSVAPTSTVIRGICSTVFQNVLSFFIVLFEGKDVLQMVDKNFLTMQDAPEFFSELKQKILDEDESSLTKLSKFRALCLLRIFFSCPKDLLAACLEFLGSATKEGTSDEGWRFLTLVTSMFDDDEAIHLLDRANDGPKSCTDSIGAGIRDNEVGKKIMTDDNHVSNGDSSDRKSCLLMLVLNKDPSLQKWMLRRCKKLLDLLTNASLEITSVLQGILGMFAQQTDLEDCQVDSDEDKSDSSIYMNRNYVVPRISEEHESIDRSSGKAHSFAVGSHFDNGVSRPICIEMGEERNMSHLRCSTPRDSVNHQKFSPAVRTPVDFRSNSFEGRNDFPGVEKNQVLNMNLNSPLSRSSSGAVSNVLASPNHHFMSPTASTKSQIVWCCDGDPSAMDIVSASQQLWVGYVGPDMPESHIRFQLERFGPIEQFIFFPVKGFALVEYRRTIDAIKARHYLPGNFPCRVKFMDIGLGTRGAMNGVAVGSSCHIYVGNISSQWARDEILHESRKAIHKGPLTVIDLSCECAILMEFETPEEAVSVMLHLRQLRRERSNYNPHFGPGIGHAYMDGARPLPAHLDLKGTNSAGSPHARTLPGSPADSSRTRMSHLCSLLASLRTKYNINQNIGIHDNYMTGNSCASSMREEDKVPSSILWITIPRSSSLFLTDDELMSICNLAIGNSGSILRLMQANMQMGCGWFVECSNVDGAVSLLRNLRGCPGLFFQIEFSKPGSQNAIPFCSKPENDAMELVSPRINAENHSSGVHGAPVSQSNWHFTDSREMSEVGARKPDGYDNLSMDPHQGGNVPHLFSGTHGPSIPPPQPIQSSPFVHPVYVPSNGTWDPRGMNNHLPVNQFKTGGTPNNFQGSTVLSPFIPASVTPLAQIQGTPMQPPYNQQIPPSIVPPPLSSLPPPQPAMPPPLPPSPPPLPQTQPPLVPPPPGSPPPPPPPPLPVQEPVNMECSGQSLQYQWQGNLCKSGVNYCTIYACRADSDICRYSNAIPEPAEWPTKLDMTKRTDFRHVKSTFAATPSHRREVCRLIPSSACDHRRFQDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPDPSDCLIALVLPKETNFEWM* 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02153 1277 MobiDBLite consensus disorder prediction 1055 1117 - -
Rops9g02153 1277 CDD SPOC_FPA-like 1131 1269 - -
Rops9g02153 1277 MobiDBLite consensus disorder prediction 750 767 - -
Rops9g02153 1277 SUPERFAMILY RNA-binding domain, RBD 556 626 IPR035979 GO:0003676
Rops9g02153 1277 MobiDBLite consensus disorder prediction 17 49 - -
Rops9g02153 1277 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 5 1228 - -
Rops9g02153 1277 Gene3D - 558 641 IPR012677 -
Rops9g02153 1277 MobiDBLite consensus disorder prediction 744 767 - -
Rops9g02153 1277 MobiDBLite consensus disorder prediction 1 50 - -
Rops9g02153 1277 Pfam SPOC domain 1126 1268 IPR012921 -
Rops9g02153 1277 SMART rrm1_1 568 631 IPR000504 GO:0003723
Rops9g02153 1277 MobiDBLite consensus disorder prediction 1048 1117 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02153 9 39466908 39477483 Rops9g02153 9 39466908 39477483 ECH