Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01042 ATGGGAAAGTCAACGGCATGTTTGGTTGGTGCCATTGTGATCTTGTGTTGTTGCATAAGCCATGTCACATCTGATGCATCAGATCATCGTTACAAAGAAGGAGATTCAGTCCCATTTTATGCCAACAAGGTGGGACCCTTTCATAATCCCAGTGAGACATACAGATATTATGATCTTCCCTTTTGCTCACCAGCTAATGTGGAAGAAAAGAGAGAAGATCTTGGTGAAGTTTTAAATGGGGATCGATTAGTTGTTGCTCCTTACAAACTGGACTTCCTAATTGATAGAGAACCCGAGAGTATCTGCCGAAAGAGGCTAACAAGAAAAGAGGTTGCTCAATTCAGAAAAGCTGTCTTGAAGGACTATTTTTTCCAAATGTACTATGATGACTTGCCTATTTGGGGTTTCCTTGGAAAATTTGATAGTGAAGACCAAGATGACACAACTGGGGCCACAGTATATCTTTTTAAGCATATCCATTTTGAGATCCTATACAATAAGGATCGCATCATTGATGTATTTATTCGAAATTATCCAAATGCAGTTGTGAACCTGACTGAAGATAGAGAAGTAAATGTGGACTTCACATATTCTGTCAAATGGATTCAAACAGATATTCCATTTGAGAAGAGGCTGGAGAAATACTCACAGACATCCTTACTGTCACATCACTTGGAAATCCATTGGTTTTCTATTATTAACTCCTGTGTGACTGTTATCCTCTTGACTGGATTCCTTGCCATAATTCTCATGCGTGTACTTAAGAATGATTTTGTCAAGTTTACTCCTGATGAGGAAGCAGTTGATGACCTGGAGGAGAGTGGATGGAAGTATATTCATGGTGATGTGTTCAGGTACCCAAGATACAAGTCTTTGTTTGCAGCAGCACTTGGAACAGGCACCCAGCTATTTACACTTGCAATCTTCATCTTTATGCTTGCTCTAGTTGGTGTTTTCTATCCATACAACAGGGGTGCTCTCTTTACTGCACTGGTTGTCATATATGCGCTAACGTCTGGCATTGCAGGCTACTCTGCTGCTTCCTTCTATTACATGATTGAAGGGAAAAACTGGGTTAAAATTTTGGTGTTGACTGGAAGTTTGTTCTCCGGACCATTGTTTTTGACATTCTGCTTTCTTAATACTGTTGCACTTGCTTATAAATCCACTGCAGCACTGCCATTTGGAACAATTGTGGTTATTTTCCTCATATGGACTCTAGTAACCTCACCTTTACTAGTATTGGGTGGGATTGCTGGTAAGAATAGCAGATCAGAGTTTCAAGCTCCTTGTCGCACCAACAAGTATCCTAGGGATATCCCCCAACTACCTTGGTACCGTAGAACTCTTGCTCAAATGGCTATGGCAGGATTTTTGCCATTCAGTGCCATTTACATTGAACTCTACTACATATTTGCTAGTGTTTGGGGTCACCAAATTTACACCATATACAGCATTTTGTTCATTGTTTTCATCATCCTCTTGATTGTAACTGCTTTTGTTACTGTGGCATTGACATACTTTCAGCTTGCTACTGAAGACCATGAATGGTGGTGGAGGTCTTTCCTTTGTGGGGGATCAACTGGCTTGTTCATATATGGGTACTGCATGTATTACTACCATGCAAGATCAGATATGTATGGTTTCATGCAAACCTCTTTCTTTTTTGGCTACATGGCATGCATTTGCTATGGCTTCTTTCTCATGCTTGGAACTGTGGGTTTCCGTGCTTCTTTAATCTTTGTCCGTCACATATATCATTCTATCAAGTGTGAATAG 1779 0.4025 MGKSTACLVGAIVILCCCISHVTSDASDHRYKEGDSVPFYANKVGPFHNPSETYRYYDLPFCSPANVEEKREDLGEVLNGDRLVVAPYKLDFLIDREPESICRKRLTRKEVAQFRKAVLKDYFFQMYYDDLPIWGFLGKFDSEDQDDTTGATVYLFKHIHFEILYNKDRIIDVFIRNYPNAVVNLTEDREVNVDFTYSVKWIQTDIPFEKRLEKYSQTSLLSHHLEIHWFSIINSCVTVILLTGFLAIILMRVLKNDFVKFTPDEEAVDDLEESGWKYIHGDVFRYPRYKSLFAAALGTGTQLFTLAIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIAGYSAASFYYMIEGKNWVKILVLTGSLFSGPLFLTFCFLNTVALAYKSTAALPFGTIVVIFLIWTLVTSPLLVLGGIAGKNSRSEFQAPCRTNKYPRDIPQLPWYRRTLAQMAMAGFLPFSAIYIELYYIFASVWGHQIYTIYSILFIVFIILLIVTAFVTVALTYFQLATEDHEWWWRSFLCGGSTGLFIYGYCMYYYHARSDMYGFMQTSFFFGYMACICYGFFLMLGTVGFRASLIFVRHIYHSIKCE* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01042 592 Pfam Endomembrane protein 70 53 549 IPR004240 GO:0016020
Rops9g01042 592 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 23 592 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01042 Rops-Chr9 17081304 17084776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01042 22 592 Miscellaneous Gene Families AT2G01970 78.109 0.0 932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01042 9 17081304 17084776 Rops9g01042 9 17081304 17084776 ECH