Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00616 ATGATGATGTTTGAAGACATGGGGTTTTGTGGTGATTTGGATATGTTATGTGGTCCCCTTGGGGAAGGGGATGTTACTGTCAGGCAAACTGAACAAGATGCAGTTGTTGAAGATGATTACAGTGATGAAGAACTTGATGTGGATGAGCTCGAGAGGAGGATGTGGAGGGACAAAATGCGCCTCAAGCGATTGAAGGAACAAACCAAGGCTAAGGAGGGAGTTGATGCAGCGAAGCAAAGGCAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATTTTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCACAAGGATTTGTTTATGGGATCATCCCCGAGAAGGGAAAACCAGTGACTGGGGCATCTGACAATCTTCGTGAATGGTGGAAGGATAAGGTTAGGTTCGATCGGAATGGTCCAGCTGCCATAGCCAAGTATCAAGCAGATAATGCAATCGCTGGAAAGAATGATGGATGCAATTCCATTGGTCCAACTCCGCACACCTTGCAAGAGTTACAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGACGGTTCCCATTAGAGAAGGGTGTTCCTCCTCCATGGTGGCCCACTGGGAACGAAGAATGGTGGCCCCAAATTGGTTTACCTAAAGATCAAGGCCCTCCACCATACAAGAAACCTCATGACCTGAAGAAGGCATGGAAGGTTGGTGTTCTAACTGCTGTTATCAAGCACATGTCTCCTGATATTGCCAAGATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAGATGACAGCCAAGGAAAGTGCAACCTGGCTTGCTATCATCAATCAAGAGGAAGCCTTGGCTCGAGAGCTTTATCCTGATTATTGCCCCCCATTATCCTCTGCTGGAGGCAGTGGATCTTTGGCCATGAATGATTGCAGTGAGTATGATGTTGAAGGGGCTGAGGATGAGCCGAACTTTGATGTGGAGGACCGAAAACCTGAGAATCTTCATCCACCCAATCTTGGGATGGAGAGAATGAGGGGAAGGCTGCCAGTTCAGCAACCTCCTCATCCCATCAAGGGAGAGGTTGTCACAAACTTGGATTTCATTAGGAAGAGGAAGATCTCTAATGACTTTAACATGATGATGGATCAGAAAATTTACACATGTGACCATCCTCAGTGCCCTTACAGTGAAGTTCGCCTTGGTTTTCAAGACAGGTCTTCTAGGGACAATCATCAATTGAATTGTCCATATAGAAGCAGTTCTGCAGATTTTGGTGGTCCTAATTTTCATGCTACTGAGGTTAAGCCAGTTATATTCCCCCAATCCTATGTGCAACCAAATACTACATCTCAGTCCTTTGTTCAACCCAATACTACAGCTCAGTCTGCTAGTTTGGTTCCACCTTCATTTGATCTAATAACAGGGCTTGGAGTCCCAGAGGATGGCCAGAAAATGATTAGTGAACTTATGTCCATCTATGATACAAATGTTTTAGGTAACAAGAACATGAGTTCCACTAATTGTCTTGCTGCAGAAAATCAAAACCTTTCCCAGCCCAGCATTCAGCAACAACAGGACAATTTCTTTTCTGGTCAAGGAATGACGATGGAAGGAAACTTCTATGCACGAGAGGAAGGTCAATTTGACCGGTTCAAGGCTATGAACTCTCCTTTTGAGACCAACCACAACAACAACAACAACAACAATAATATCCATCTGATGTTTGGTTCTCCTTGTGATTTGGCATCCTTTGATTTCAAGGAGGATATACAAGGTGTAGGGATGGATCCTCTTCACAAACAACCAGATGTTTCAATATGGTATCAGTGA 1869 0.4468 MMMFEDMGFCGDLDMLCGPLGEGDVTVRQTEQDAVVEDDYSDEELDVDELERRMWRDKMRLKRLKEQTKAKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIAGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLSSAGGSGSLAMNDCSEYDVEGAEDEPNFDVEDRKPENLHPPNLGMERMRGRLPVQQPPHPIKGEVVTNLDFIRKRKISNDFNMMMDQKIYTCDHPQCPYSEVRLGFQDRSSRDNHQLNCPYRSSSADFGGPNFHATEVKPVIFPQSYVQPNTTSQSFVQPNTTAQSASLVPPSFDLITGLGVPEDGQKMISELMSIYDTNVLGNKNMSSTNCLAAENQNLSQPSIQQQQDNFFSGQGMTMEGNFYAREEGQFDRFKAMNSPFETNHNNNNNNNNIHLMFGSPCDLASFDFKEDIQGVGMDPLHKQPDVSIWYQ* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00616 622 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Rops9g00616 622 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Rops9g00616 622 MobiDBLite consensus disorder prediction 329 354 - -
Rops9g00616 622 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Rops9g00616 622 Coils Coil 47 67 - -
Rops9g00616 622 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Rops9g00616 622 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 29 601 IPR006957 GO:0003700|GO:0005634
Rops9g00616 622 MobiDBLite consensus disorder prediction 67 91 - -
Rops9g00616 622 FunFam Ethylene insensitive 3-like 1 168 305 - -
Rops9g00616 622 FunFam Ethylene insensitive 3-like 1 80 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00616 Rops-Chr9 8758799 8762328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00616 2 621 EIL Transcription Factor Family AT3G20770 60.758 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops9g00616 EIN3 1.7e-131 No_clan