Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00429 ATGTCATCCAGCAGTTCTTTGAATGTGGAATTGTCAAAGAAGACTTCATTTTTGGGTTTGAAACTATGGGTTTTGATTGGGATAGGCGTTGGTGCTTTTATAGTGCTAATTCTTGGTATAATATCTATATGGGTGATGTTTCGGCGAAAGTCTAGGAGATCTCTGGACAAGTGCTCTCTATCCCAAATACCAAATGTCTCGAAAGATATCAATGTCGACAAGGTTGGGGTGCAAAGTTCTGATGCTCAACCAGGTAATATGTTCATTCCTGTTCATGACAAGGCAAGTGATGATAATTCAGATAAGGTATCAGTTCATATGGGGATGAGCAAATCCAGTGATCCTGATAATCTCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATATCAGGGGAAGAAGGAAGCTCTGGGTATGTTAAGAAGCAGTCTACATTGTCACATGGAGGACTGATGGCTCCCTCTCCTTTAATTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAACTAGCTACCAGTCGTTTCTCAGCTGATAACATTATTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGCAGACTGATCAATGGAACCGAGGTGGCAGTGAAGAAACTTCTTAACAACTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAACATCTTGTGCGTCTGCTTGGCTATTGTGTAGAAGGAGTTCACAGGCTGCTGGTATATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGGGACATGCGCCAGCATGGGACACTTACTTGGGAGGCCCGCATGAAAGTTATACTTGGCACAGCCAAAGCGCTTGCTTACTTACATGAGGCAATAGAACCAAAAGTTATTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAGTTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATAACTACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAATAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTGCTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGTCCTGCCAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGTCAAGGAGGGCCGAGGAAGTTGTGGACTCAAGCCTTGAAGTTAAACCGTCAGCACGTGCTTTAAAGCGTGCCCTTCTGGTTGCACTTAGGTGTATTGATCCTGATGCAGACAAGAGGCCCAAAATGAGTCAAGTTGTAAGGATGCTTGAAGCTGATGAATATCCATTCCGAGAGGATCGAAGGAATAGAAAGAGCAGCACTACAAGTATGGAAGTTGAAACCGCGAAGGATATTTCTGGTCCATCTAATGCTGAAAAGGTGGGGCATTCTAAAAGCTACTTGCCTGAAACAACTCAAGGATAG 1533 0.4312 MSSSSSLNVELSKKTSFLGLKLWVLIGIGVGAFIVLILGIISIWVMFRRKSRRSLDKCSLSQIPNVSKDINVDKVGVQSSDAQPGNMFIPVHDKASDDNSDKVSVHMGMSKSSDPDNLSQCSSIYHHERGFSSISGEEGSSGYVKKQSTLSHGGLMAPSPLIGLPEFSHLGWGHWFTLRDLELATSRFSADNIIGEGGYGVVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMRQHGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGSRRAEEVVDSSLEVKPSARALKRALLVALRCIDPDADKRPKMSQVVRMLEADEYPFREDRRNRKSSTTSMEVETAKDISGPSNAEKVGHSKSYLPETTQG* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00429 510 Gene3D Transferase(Phosphotransferase) domain 1 264 477 - -
Rops9g00429 510 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00429 510 CDD STKc_IRAK 194 460 - -
Rops9g00429 510 Coils Coil 208 228 - -
Rops9g00429 510 MobiDBLite consensus disorder prediction 103 118 - -
Rops9g00429 510 MobiDBLite consensus disorder prediction 466 510 - -
Rops9g00429 510 MobiDBLite consensus disorder prediction 90 118 - -
Rops9g00429 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Rops9g00429 510 FunFam Putative receptor-like serine/threonine-protein kinase 264 474 - -
Rops9g00429 510 PANTHER OS01G0323000 PROTEIN 1 483 - -
Rops9g00429 510 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00429 510 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Rops9g00429 510 SUPERFAMILY Protein kinase-like (PK-like) 172 463 IPR011009 -
Rops9g00429 510 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Rops9g00429 510 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00429 510 FunFam Putative receptor-like protein kinase 170 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00429 Rops-Chr9 5935079 5938441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00429 19 503 Trihelix Transcription Factor Family AT1G70460 38.493 8.36e-97 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Rops9g00429 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00429 - - gmx:100778444 881.322