Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02692 ATGATAACTGCTTTGGACTTGTACCATGTTCTCACTGCTGTTGTGCCTCTTTATGTGGCTATGATCCTTGCATATGGTTCAGTAAAATGGTGGAAAATCTTTAGCCCTGATCAATGTTCCGGCATCAACCGTTTTGTTGCTCTGTTCGCGGTTCCTTTACTCTCCTTCCATTTCATCTCCACCAACAACCCTTATGCAATGAACTACAAGTTCATAGCTGCGGATTCGCTACAGAAAGCCATAGCTTTGACAGTGTTGGCAATATGGTCAAGAACAAGCTCAAGAGGGTCCCTTGAATGGTCCATAACCTTGTTCTCCCTCTCCACACTCCCTAATACTCTTGTTATGGGAATCCCATTGCTTAAGGGCATGTATGGGGACTCCTCAGGCACCCTCATGGTTCAAATCGTGGTTCTTCAGTGTATCATATGGTACACTTTGATGTTGTTCTTGTTCGAATACAGGGGTGCTAGGCTTCTCATAGTGGAGCAGTTCCCTGACACTGCAGGGTCTATTATATCCTTCAAGGTTGACTCTGATATTATCTCTTTGGATGGGAAAGAGCCTCTTCAAACTGAAGCTGAGGTTGGTGAAGATGGGAAGCTTCATGTAACTGTGAGAAAGTCAACAAGTTCACGCTCTGAGATATTCTCAAGGCGCTCTCATGGACCAAACTCTGGGGTTTCACTCACCCCACGTCCTTCAAACTTGACAAATGCTGAGATTTACTCTCTTCAGTCTTCAAGGAACCCTACACCAAGAGGGTCTAGTTTCAACCACACGGATTTTTATTCAATGGTCAATGGGAGGAACGTGAGTCCAAGACAGTCAAACTTTGGAAGTTTGGGTTTTGATGAGGAGAGTGGAATGGGTAGAGTCAATGGTGGTGGTGGGGCAGGGTACCCGGCTCCTCCTAATGCCGGAATATTTTCTCCGGTGACTGGTCCGGGGGGTAAAAAGAAGGCCAATGGTGGTGTTGATGGTGGAAAAGATCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTCTCAGAAGGTGGAATCCATGTCTTCAGAGGTGGAGATTATGGGAATGATCAGCTTGTTGGTGGGGTAGCTCACCAAAAAGATTATGATGAGTTTGGTCACGATGAGTTTAGCTTCGGAAACAGAACTGTTGCTAATGGGGTGGACAAGGATGGACCAGTGCTTTCCAAGCTTGGTTCAAGCTCCACCACCGAGCTCCATCCGAAAGATGCATCTCAAGGAGAATCAAAACCCACGTCGTTGCCACCTGCCAGTGTTATGACCAGACTCATTTTAATAATGGTTTGGAGAAAGCTGATTAGGAATCCCAACACTTACTCTAGCCTTATTGGTCTCACATGGTCTTTGATCTCATTCAAGTGGAATGTTGTTATGCCTGCAATTGTTGCAAAGTCAATATCAATTTTATCTGATGCAGGCCTTGGAATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAGCCAAGGATTATTGCATGTGGGAACACGGTTGCTTCCTTTGCTATGGCAGTTCGTTTTCTTACTGGCCCTGCAGTCATGGCTGTTGCTTCAATCATTGTAGGGCTCAGGGGAGTTTTGTTGCACATAGCTATTGTACAGGCTGCTCTGCCTCAGGGTATTGTCCCATTTGTGTTTGCTAAGGAATACAATGTTCATCCTGACATATTAAGCACTGGGGTTATATTTGGGATGCTAATTGCTCTTCCTATCACTCTAGTTTACTACATTTTGCTGGGGCTTTGA 1776 0.451 MITALDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADSLQKAIALTVLAIWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDSSGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDIISLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGRNVSPRQSNFGSLGFDEESGMGRVNGGGGAGYPAPPNAGIFSPVTGPGGKKKANGGVDGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNDQLVGGVAHQKDYDEFGHDEFSFGNRTVANGVDKDGPVLSKLGSSSTTELHPKDASQGESKPTSLPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLISFKWNVVMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNTVASFAMAVRFLTGPAVMAVASIIVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02692 591 MobiDBLite consensus disorder prediction 399 425 - -
Rops8g02692 591 MobiDBLite consensus disorder prediction 393 425 - -
Rops8g02692 591 NCBIfam auxin efflux carrier 1 591 IPR014024 -
Rops8g02692 591 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 591 - -
Rops8g02692 591 MobiDBLite consensus disorder prediction 213 235 - -
Rops8g02692 591 Pfam Membrane transport protein 9 586 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02692 Rops-Chr8 60960382 60963600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02692 1 582 Organic Solute Cotransporters AT1G73590 65.683 0.0 754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02692 8 60960382 60963600 Rops8g02692 8 60960382 60963600 ECH
Rops9g02229 9 41219701 41225367 Rops8g02692 8 60960382 60963600 PCT