Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00563 ATGGCAGAGGTTGAGGACAGAGAGAAAGGTCACCACCATCATCACATTTCTTCAATGAGCAATTTTCCTAGAGATCTGTTGAATAGGTTCATGGCGGTGAACAATCACCACCACCATCACAACATGGCGAGGGTGGAGCAACATGATCATGCAGATGCAGCAGAAAAAGAAGAGATAGAGCTAAGTCTTGGGCTTTCAATGAATGGTAGATTTGGGGTGGACCCAACAGCGAAGAAGATCAAGAGAACTTCATCAATACCTGAATTTGTTAACCCTGTGAGAGATGAAGAAACTGGGTATGTGGTACCGGTGGCATGTAACCCTCTTATGAGGACTTGTTCTTTACCTACTGAGACTGAAGAAGAGTGGAGGAAGAGGAAGGAGTTGCAGACACTGAGGAGAATGGAAGCTAGGAGGAAGCGTTCGGAGAAGCAGAGAAACTTGAAGGCTATAAGGGAAAGGAATCGCACTTTGTCTGAAGAGATTGGTTCGGAAGGGAATAATAACAATCTGGTGGAAACAGGTGCAGGTGCTTTGAATGAAGTTACCACCTTGGGGAGAACCATGTCTTTGACCACTTATGTTTCTGGACTTGGTTTGAATGGGGACAAGGAAAAGGGTAATGGGTTGTTGCCACCTTCATCGCCTCCACAGGGTTCAATTGGTTCTTCTTCTCAGGGAACTGGGTCTTCTGGGAACTCAGAATCTGAGTGTCAACAAGGTCAAGGAAGAACACCAATGGATTCTAGAAGCCCTATTGGTACCAACCTGTTGCCAGATGGTGAACTGAAATCACCTTTAACCCAAGTAGCCAGAGTTTCAGAAAACTCGGGCAAAAAGGCTGCTGCAGTAACAATGAGAAACCAGCCTAACAAACCTGAAAACAGAACTAAGGACATTGTGAGGAACTTGATGGAAGACATGCCAAGTGTATCTACCAAAGGAGAGGGTCCTAATGGAAAAAAAATAGAAGGTTTTCTTTACAGGTATGGGAAAGGTGAGGAAGTGAGGATATTGTGTGTTTGCCATGGTAGTTTTCTCACCCCTGCTGAGTTTGTCAAGCATGCTGGTGGAGCTGATGTGGCCAACCCATTGAAGCATATTGTTGTTAGTCCAAGCTTGTTGTAA 1128 0.4495 MAEVEDREKGHHHHHISSMSNFPRDLLNRFMAVNNHHHHHNMARVEQHDHADAAEKEEIELSLGLSMNGRFGVDPTAKKIKRTSSIPEFVNPVRDEETGYVVPVACNPLMRTCSLPTETEEEWRKRKELQTLRRMEARRKRSEKQRNLKAIRERNRTLSEEIGSEGNNNNLVETGAGALNEVTTLGRTMSLTTYVSGLGLNGDKEKGNGLLPPSSPPQGSIGSSSQGTGSSGNSESECQQGQGRTPMDSRSPIGTNLLPDGELKSPLTQVARVSENSGKKAAAVTMRNQPNKPENRTKDIVRNLMEDMPSVSTKGEGPNGKKIEGFLYRYGKGEEVRILCVCHGSFLTPAEFVKHAGGADVANPLKHIVVSPSLL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00563 375 MobiDBLite consensus disorder prediction 213 252 - -
Rops8g00563 375 Coils Coil 125 161 - -
Rops8g00563 375 MobiDBLite consensus disorder prediction 202 296 - -
Rops8g00563 375 MobiDBLite consensus disorder prediction 1 20 - -
Rops8g00563 375 PANTHER AFP HOMOLOG 2 22 373 IPR031307 GO:0007165
Rops8g00563 375 Pfam Putative nuclear localisation signal 109 178 IPR032310 -
Rops8g00563 375 MobiDBLite consensus disorder prediction 269 291 - -
Rops8g00563 375 Pfam Ethylene-responsive binding factor-associated repression 55 88 IPR012463 -
Rops8g00563 375 Pfam Tify domain binding domain 336 370 IPR032308 -
Rops8g00563 375 MobiDBLite consensus disorder prediction 136 169 - -
Rops8g00563 375 MobiDBLite consensus disorder prediction 136 160 - -
Rops8g00563 375 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00563 Rops-Chr8 11571607 11575303 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00563 8 11571607 11575303 Rops8g00563 8 11571607 11575303 ECH