Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02538 ATGATGGAGTCAGAAGGGGAAGCTGGGGCAAAGCCAATGAAGGCATTGGGTGGCCAAGTCTGCCAGATATGTGGTGATAATGTTGGGCACACTGTGAATGGTGAACCATTCATTGCTTGCGATGTTTGTGCTTTCCCTGTCTGCAGGCCGTGCTATGAGTATGAGAGGAAGGATGGGAATCAGTCTTGCCCCCAGTGCAAAACTCGGTACAAGAGGCACAAAGGTAGTCCTGCAATTCTTGGGGACCGGGAAGAGGATGGTGGTGCTGATAACGATGCCAATGACTTCAATTACAATTCAGAAAATCAGAGCCAAAAGCAAAAGATTGCAGAACGCATGTTGAGCTGGCAAATGGCATATGGGAGAGCGGAGGAGGTTGGCGCTCCAAATTATGATAAGGAAGTTTCTCACAATCACATTCCTCTGCTGACTGGTGGACAAGAGGTATCTGGAGAATTATCTGCAGCCTCACCTGAGAGGCTCTCAATGGCTTCTCCTGGAGTTACTCGTGGGAAGCGTGTCCATAATCTTCAATACTCATCTGATATTAATCAATCACCAAATATTAGGGTTGTGGATCCAGGATTGGGCAATGTAGCATGGAAAGAAAGAGTTGATGGCTGGAAAATGAAACAAGATAAGAATGTTGCTCCACCAATGAGTACAGGACAAGCTGCTTCTGAAAGAGGAGCTGGAGATATTGATGCTAGTACTGATGTGCTTGTGGATGATTCCTTGTTGAATGATGAAGCTCGTCAACCTCTCTCCAGGAAGGTTTCTGTCCCATCTTCTAGGATAAATCCATACCGTATGGTCATTGTTCTGCGGCTGATTATCCTCTGCATTTTTTTGCATTATCGCATAACCAATCCGGTGCCCAATGCTTTTGCATTGTGGCTGATATCAGTTATATGCGAGATTTGGTTTGCCGTATCTTGGATATTGGATCAATTCCCTAAGTGGCTCCCTGTGAACCGTGAAACATATCTTGACAGGCTTGCACTAAGATATGATCGGGAAGGGGAACCATCACAGCTAGCAGCTGTTGACATTTTTGTCAGTACTGTTGATCCATTAAAGGAGCCCCCACTTGTGACTGCAAATACTGTCCTATCTATTCTTGCTGTTGACTATCCAGTGGATAAGGTCTCATGTTATGTCTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTGGCTGAGACATCAGAATTCGCAAGGAAATGGGTTCCCTTCTGCAAGAAATATGCAATTGAGCCCCGGGCACCTGAGTGGTATTTTGTACAGAAGATTGACTACTTGAAAGATAAGGTTCAACCATCCTTTGTCAAAGAGCGTAGAGCAATGAAGAGAGAATATGAAGAATTTAAAATTCGTATCAATGGACTTGTTGCGAAAGCAACAAAAGTTCCTGAAGAAGGATGGGTGATGCAAGATGGTACACCATGGCCTGGAAACAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGATTCCAACATCACAAGAAGGCTGGTGCCATGAATGCACTTGTTCGAGTATCAGCCGTCCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAAGCCTTAAGGGAAGCCATGTGCTTTATGATGGATCCCAATCTTGGAAAAAATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAACCGAAATACTGTTTTCTTTGATATAAATTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGATGCGTCTTTAATAGAACAGCTTTATATGGTTATGAGCCTCCTGTTAAACCCAAACATAAAAAGCCTGGGTTGCTTTCTTCACTCTGTGGTGGAGATCGAAATAAGAGCTCAAAATCTAGCAAGAAAGGCTCAAAAAAGAAAATCTCTAGCAAGCATGTTGACCCAACTGTGCCCATCTTCAGTCTAGAGGATATAGAAGAAGGGGTGGAAGGTGCTGGATTTGATGATGAGAAATCACTACTCATGTCACAAATGAGCCTCGAGAAAAGGTTTGGTCAGTCTGCTGTTTTTGTTGCCTCTACACTAATGGAAAATGGTGGTGTTCCTCAGTCTGCGACTCCAGAAACTCTTCTCAAGGAGGCTATTCATGTTATCAGTTGTGGTTATGAGGATAAAACAGAATGGGGAAGTGAGATAGGATGGATCTATGGTTCTGTCACAGAAGATATTCTTACTGGATTTAAGATGCATGCCCGTGGTTGGAGGTCTATATACTGCAATCCCAAGCTCCCAGCATTTAAAGGTTCTGCTCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTTCGTTGGGCTTTAGGTTCGGTGGAAATTCTTCTAAGTCGACACTGTCCTATCTGGTATGGTTATAGTGGAAGGCTAAAGTGGCTTGAGAGGTTCGCCTATATAAACACCACAATCTATCCAATCACTTCCATTCCGCTTCTTATGTATTGTACCTTACCTGCTGTCTGTCTCCTGACTAACAAGTTTATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTTATCTCTCTCTTTCTTTCTATCTTTGCAACGGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATTGACGAGTGGTGGAGAAATGAACAATTTTGGGTTATTGGTGGTGTTTCATCCCATCTTTTTGCCGTTTTCCAAGGTTTACTCAAAGTGCTTGCTGGAATTGACACTAACTTCACCGTTACCTCAAAGGCATCAGATGAAGATGGAGACTTTGCAGAACTCTACTTGTTTAAATGGACAACCCTTCTCATTCCACCCACAACCCTTCTCATCATAAACCTTGTGGGAGTTGTTGCAGGGATCTCCTATGCGATTAACAGTGGCTACCAATCATGGGGTCCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATTCATCTCTATCCCTTCCTCAAAGGTCTCATGGGGCGCCAGAATAAAACTCCAACCATTGTGGTGGTTTGGTCCATTCTGCTTGCATCCATTTTTTCTCTTTTATGGGTCAGAATTGATCCATTTACAACAAGAGTCACTGGTCCTGATGTTGAGCAGTGTGGAATTAACTGCTAA 3234 0.4338 MMESEGEAGAKPMKALGGQVCQICGDNVGHTVNGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDREEDGGADNDANDFNYNSENQSQKQKIAERMLSWQMAYGRAEEVGAPNYDKEVSHNHIPLLTGGQEVSGELSAASPERLSMASPGVTRGKRVHNLQYSSDINQSPNIRVVDPGLGNVAWKERVDGWKMKQDKNVAPPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLIILCIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYAIEPRAPEWYFVQKIDYLKDKVQPSFVKERRAMKREYEEFKIRINGLVAKATKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKPKHKKPGLLSSLCGGDRNKSSKSSKKGSKKKISSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCNPKLPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERFAYINTTIYPITSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNKTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02538 1077 SUPERFAMILY Nucleotide-diphospho-sugar transferases 363 891 IPR029044 -
Rops7g02538 1077 MobiDBLite consensus disorder prediction 212 232 - -
Rops7g02538 1077 FunFam Cellulose synthase 4 95 - -
Rops7g02538 1077 CDD mRING-HC-C4C4_CesA 19 69 - -
Rops7g02538 1077 Pfam Zinc-binding RING-finger 11 86 IPR027934 -
Rops7g02538 1077 SUPERFAMILY RING/U-box 6 89 - -
Rops7g02538 1077 Pfam Cellulose synthase 349 1070 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops7g02538 1077 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 95 IPR013083 -
Rops7g02538 1077 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 476 640 IPR029044 -
Rops7g02538 1077 MobiDBLite consensus disorder prediction 645 678 - -
Rops7g02538 1077 FunFam Cellulose synthase 466 640 - -
Rops7g02538 1077 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 252 1044 - -
Rops7g02538 1077 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02538 Rops-Chr7 47307158 47315908 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02714 3 57501023 57509656 Rops7g02538 7 47307158 47315908 PCT