LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops7g01807	ATGGCACTGCGATCTTCAAAACTCCTTTCTCGTTCTTCTCATCTCTTCTTCGCTGAGTTGCAGCCCTTCATTCCTCCCCTCACTCGCAAGATAAACATGGATGCAAAGAGTGTTGCCTCCCAGCTTAATAGTTCTGGGCTGTTGAGGACTCAGGGACTTATTGGCGGGAAATGGATTGATGCTTATGATGGCAAAACCTTTAAGGTTTATAATCCAGCAACTGGTGAGTCTATAGCAGACGTGGCATGCATGGGTGGAATAGAGACGAATGATGCAATATCTTCAGCCTCTGATGCATTCAGATCATGGAGCAAAACCACTGCTGCTGAGAGAAGCAAATTTCTGAGGAAATGGTATGATTTGCTAATAGCACGTAAAGAAGAGCTAGCACAACTTATAACCTTGGAGGGTGGGAAGCCTCTTAAAGAGTCTTTGGGTGAGATAACCTACGGAGCTGGCTTTATTGAGTTTGCATCTGAGGAGGCTAAACGTATATATGGGGATATAATTCCTGCTCCTCTATCTGATCGGCGGTTATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCCATTACACCTTGGAACTTTCCCCTTGCCATGATTACCCGAAAGGTTGGTCCAGCCCTTGCATGTGGTTGCACAGTGGTCATAAAGCCCTCTGAACTTACGCCTCTTACTGCTTTAGCTGCTGCAGAACTTTCTATCCAAGCTGGAATACCAGCGGGTGTTGTGAATGTGGTTATGGGAAATGCTCCTGATATTGGGGATGCTTTACTTGCAAGTCCACAGGTACGGAAGATCACTTTCACAGGCTCGACAGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGAGACGGTTAAAAAAGTGTCTCTGGAACTCGGTGGCAATGCACCTTGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTAAAAGGAACCCTTGGAGCAAAGTTTCGTAATAGTGGACAAACATGTGTTTGTGCAAATAGAATTCTTGTGCAAGAAGGTATATATGAGAAATTTGCAAATGCATTGTGTGATGCTGTTCAGAATATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTGGTTCAGGGTCCTCTGATCAATGAAGCTTCTGTAAAAAAGGTCGAGTCCTTAATTCAAGACGCTACATCAAAGGGGGCAAAAGTAATTCTTGGGGGTAAAAGACACAGCCTTGGATTTTCTTTTTATGAACCAACGGTCATTAGTGATGTCAACAATGAAATGCTCATATCAAGACAGGAAGTATTTGGACCTGTTGCACCCCTTTTGAAGTTCAAAACCGAAGAGGAGGCTATCAGAATCGCTAACGACACTAATGCAGGTCTGGGTTCATACATATTTACAAATAGTATCCAACGATCATGGCGTGTTGCTGAGGCTCTTGAATATGGACTTGTGGGTGTTAATGAAGGAGTAATTTCAACAGAGGTGGCTCCATTTGGTGGTTTTAAGCAGTCTGGCCTTGGAAGAGAAGGCTCCAAATATGGGATGGATGAATATTTGGAGATCAAGTATGTCTGCTTGGGAAACATGAACAAGGAAGTATGA	1581	0.4377	MALRSSKLLSRSSHLFFAELQPFIPPLTRKINMDAKSVASQLNSSGLLRTQGLIGGKWIDAYDGKTFKVYNPATGESIADVACMGGIETNDAISSASDAFRSWSKTTAAERSKFLRKWYDLLIARKEELAQLITLEGGKPLKESLGEITYGAGFIEFASEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLGAKFRNSGQTCVCANRILVQEGIYEKFANALCDAVQNMKVGDGFSEGVVQGPLINEASVKKVESLIQDATSKGAKVILGGKRHSLGFSFYEPTVISDVNNEMLISRQEVFGPVAPLLKFKTEEEAIRIANDTNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMNKEV*	527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops7g01807	526	SUPERFAMILY	ALDH-like	46	523	IPR016161	GO:0016491
	Rops7g01807	526	ProSitePatterns	Aldehyde dehydrogenases glutamic acid active site.	293	300	IPR029510	GO:0016491
	Rops7g01807	526	CDD	ALDH_F5_SSADH_GabD	69	519	-	-
	Rops7g01807	526	FunFam	Succinate-semialdehyde dehydrogenase I	64	309	-	-
	Rops7g01807	526	ProSitePatterns	Aldehyde dehydrogenases cysteine active site.	321	332	IPR016160	GO:0016491
	Rops7g01807	526	NCBIfam	succinate-semialdehyde dehydrogenase	69	515	IPR010102	GO:0009013\|GO:0009450
	Rops7g01807	526	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	297	486	IPR016163	GO:0016620
	Rops7g01807	526	PANTHER	SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL	44	522	-	-
	Rops7g01807	526	FunFam	Succinate-semialdehyde dehydrogenase I	297	486	-	-
	Rops7g01807	526	FunFam	Aldehyde dehydrogenase, putative	489	515	-	-
	Rops7g01807	526	Pfam	Aldehyde dehydrogenase family	58	517	IPR015590	GO:0016491
	Rops7g01807	526	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	64	511	IPR016162	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops7g01807	Rops-Chr7	28614100	28629398	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops7g01807	7	28614100	28629398	Rops7g01807	7	28614100	28629398	ECH