Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01770 ATGGACAAATCAGAGCAGACTCAGCAGCAGCAGCAACAACAGCATGTGATGGGAGTTGTAGCAGGTGCTGGCCAAATGGCCTATTCTTCTCAATACCAGACTGCTCCCATGGTGGCTTCTGGCACACCTGCTCTAGCTGTTCCTTCCCCAACACAGCCTCCGGCTGCCTTCCCTAATTCCACTCACCAGCTTGCATACCAGCAAGCACAGCATTTCCACCATCAACAGCAGCAACAGCAACAACAGCAGCTTCAAATGTTCTGGGCAAACCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAAAACCATAGTCTCCCACTTGCTCGGATAAAAAAAATAATGAAAGCTGATGAAGATGTCCGGATGATTTCAGCTGAAGCTCCGGTCATATTTGCAAAAGCATGTGAAATGTTCATATTAGAGTTGACTTTGCGATCTTGGATCCACACAGAAGAGAACAAGAGGAGAACACTACAAAAGAATGATATAGCAGCTGCTATTTCAAGAAATGATGTTTTTGATTTCTTAGTTGATATCATACCAAGAGATGAGTTGAAAGAAGAGGGACTTGGAATAACAAAGGCTTCTATTCCAATAGTGGGTTCTCCAGCTGATATGCCATATTATTATGTCCCACCACAGCATCCTGTAGGACCTCCAGGGATGATCATGGGAAAGCCAGCTGATCAAGCAGCACTGTATTCTACTCAGCAGCCACGACCTCCCATGGCATTCATGCCATGGCCACATACACAACCCCAGCAACAGCAGCCACCACAACAGCAACAAACTGACTCTTGA 804 0.4527 MDKSEQTQQQQQQQHVMGVVAGAGQMAYSSQYQTAPMVASGTPALAVPSPTQPPAAFPNSTHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGITKASIPIVGSPADMPYYYVPPQHPVGPPGMIMGKPADQAALYSTQQPRPPMAFMPWPHTQPQQQQPPQQQQTDS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01770 267 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 59 253 - -
Rops7g01770 267 SUPERFAMILY Histone-fold 62 177 IPR009072 GO:0046982
Rops7g01770 267 Pfam Core histone H2A/H2B/H3/H4 69 168 IPR007125 GO:0003677
Rops7g01770 267 FunFam Nuclear transcription factor Y subunit gamma 71 183 - -
Rops7g01770 267 Gene3D Histone, subunit A 66 183 IPR009072 GO:0046982
Rops7g01770 267 MobiDBLite consensus disorder prediction 234 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01770 Rops-Chr7 27844640 27847555 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Rops7g01770 CBFD_NFYB_HMF 2.3e-17 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01770 7 27844640 27847555 Rops7g01770 7 27844640 27847555 ECH