Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01557 ATGGATATAACGGAAGTTTCAATCTTGCATCATGTGGGAATGGTGCTGATCGGTCTCTGGTTGTTATCTGCATTCAATTGGTGCCATACGATTGTTTATTTTGTAGCTTTGATCTATCTTTTTCTGGTTCATGAGCGTTATGTTACGAGGCTCCGGAGGAAGTTGCAGTTTGAGGAGAGGAAACAAGCTAATCAAAGAAGGGTGCTTTCTGATTCTGAAACAGTCCGGTGGTTGAACCATGCAATGGAAAACATATGGCCCATATGTATGGAGCAGATTGCCTCTCAGAAAATTTTACTCCCTATCATACCTTGGTTCTTAGAAAAGTACAGACCTTGGACTGCTAAAGAAGCTGTCATTCAGCACCTATACTTGGGAAGAAACCCACCTTTGCTGACCGAAGTGAGGGTACTTCGCCAGAGTGATGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTCACAGCTGATGATATGAGTGCAATACTTGCTGTGAAACTAAGAAAAAGACTGGGCTTTGGAATGTGGGCAAAGCTGCACATAACAGGAATGCACGTTGAAGGGAAGGTCTTGGTAGGTGTAAAATTTCTCCGTACATGGCCTTTTCTTGGCCGTTTGCGCATATGCTTTGTTGAGCCTCCATATTTCCAGATGACTGTCAAACCTATGTTTACTCATGGGCTTGATGTGACTGAACTTCCAGGGATTGCTGGGTGGCTAGATAAGCTTCTGTCCATTGCTTTTGAACAGACCCTTGTTGAGCCCAATATGCTGGTTGTTGATGTCGAGAAATTTGTTTCACCACAGAAAGAGCCTTGGTTCTCTGTGGATGAGAAGGACCCTGTTGCTTATGCAAAAGTAGAAGTTGTTGAAGCATCTGACTTGAAGCCATCAGATCTAAATGGATTAGCGGATCCTTATGTGAAAGGTCATATGGGCGGCTATAGATTCAGGACAAAGACACAAAGGAAAACACTTACTCCAAAATGGCATGAGGAATTTAAAATCCCCATCATAACATTGGAGTCTAGCAATGTGCTGGCTATTGAAGTTCGTGACAAGGACCATTTCTATGACGATATCCTTGGGGACTGTTCTGTGAACGTCAATGATTTTAGGGATGGGCAAAGACATGATATGTGGCTGCCACTTCAGAACATAAAAATGGGGAGGTTGCATTTGGCAGTCACTATTCTTGAAGATAATGAAAAGGAAGTTGATACTACATGTGACAAGGAAGTAGTGGACATTGAAGAAAGAAGAGATTCCTTTGCAAATGAGACTACTAATAAAAGTTCCTCTTCATCTGTTTCATCTGAAAATTCTCCGAAGTTAGCAGATAAATATGAGCCTATAGATATCGAAGGACAAAAGGAAACAGGAATTTGGGTTCATCAACCTGGAAGTGAGGTTTCCCAAACTTGGGAGCCAAGAAAAGGGAAGAGTCGACGCCTCGATACAGAAATTCACAGGGAGAATGATTTAGTTGACCACTGTAGTTCCAATGCATCTGGGTCTGTGAACAATGACAGCAGCAGACCCGATGATAATTCTGAAGATAAGCATCGAATGAAATCAGTTAGGAGGGGCCTGCACAAGATTGGTTCAGTATTTCGCAGGAGTCAAAAAAGAGAGGATGGGTCTGATTCTATTGGAGAGGAGTTTCCATCTCCACATGATAACATTAGGTCAGTCAATGCCAAGGGGATTGGCGTGCAGTTTGTCATGGAGGATAACATTTCTGGCTTTCCCGCTGGTAAGGTTCAGGTAGAAGGTGGATCAACTGAAGGGAGTGGTCCTGATAGCCCAGCCAAGGAAAATGTCAAGAATATGGCGAAGAATATTTTGAAACATGCAGAAAAATCAGCTCGTGGCTTAAAGCATGTTCTTTCCTGTAAATCAAGGAAATCTAAAGGTGACCCAATAGCAGTTCCAGAAAGACAAAATGAATCTGACTCTTCTGGTGATGAATCTCTTTCAGTTCAGTCACCCATAGATGAAAGAACTCCAGTTGCTTCGCAGCCAGTGGCCTCATTTAACAATGGTTCCCCCAATTCCAGGGTGAATGTGGTTCAGACAAGTCCATCTGACACCATTGTGGACAATAAAGCTCCAATGAAGAACATGGAAGTTGAACAAGTGCCTGAAAAGGCATGCTCCCCTGACAGGTCTGGTGAAGAATTTGTTGAATCTGTTGAACCGGAGCATGATAAAAAGGAAATGGTGGCAGATAAGTGA 2241 0.4279 MDITEVSILHHVGMVLIGLWLLSAFNWCHTIVYFVALIYLFLVHERYVTRLRRKLQFEERKQANQRRVLSDSETVRWLNHAMENIWPICMEQIASQKILLPIIPWFLEKYRPWTAKEAVIQHLYLGRNPPLLTEVRVLRQSDDDHLVLELGMNFLTADDMSAILAVKLRKRLGFGMWAKLHITGMHVEGKVLVGVKFLRTWPFLGRLRICFVEPPYFQMTVKPMFTHGLDVTELPGIAGWLDKLLSIAFEQTLVEPNMLVVDVEKFVSPQKEPWFSVDEKDPVAYAKVEVVEASDLKPSDLNGLADPYVKGHMGGYRFRTKTQRKTLTPKWHEEFKIPIITLESSNVLAIEVRDKDHFYDDILGDCSVNVNDFRDGQRHDMWLPLQNIKMGRLHLAVTILEDNEKEVDTTCDKEVVDIEERRDSFANETTNKSSSSSVSSENSPKLADKYEPIDIEGQKETGIWVHQPGSEVSQTWEPRKGKSRRLDTEIHRENDLVDHCSSNASGSVNNDSSRPDDNSEDKHRMKSVRRGLHKIGSVFRRSQKREDGSDSIGEEFPSPHDNIRSVNAKGIGVQFVMEDNISGFPAGKVQVEGGSTEGSGPDSPAKENVKNMAKNILKHAEKSARGLKHVLSCKSRKSKGDPIAVPERQNESDSSGDESLSVQSPIDERTPVASQPVASFNNGSPNSRVNVVQTSPSDTIVDNKAPMKNMEVEQVPEKACSPDRSGEEFVESVEPEHDKKEMVADK* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01557 746 SMART C2_3c 285 382 IPR000008 -
Rops7g01557 746 MobiDBLite consensus disorder prediction 586 746 - -
Rops7g01557 746 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 278 401 IPR035892 -
Rops7g01557 746 MobiDBLite consensus disorder prediction 499 513 - -
Rops7g01557 746 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 710 - -
Rops7g01557 746 MobiDBLite consensus disorder prediction 428 444 - -
Rops7g01557 746 CDD C2 287 385 - -
Rops7g01557 746 Pfam C2 domain 287 385 IPR000008 -
Rops7g01557 746 Gene3D C2 domain 270 401 IPR035892 -
Rops7g01557 746 MobiDBLite consensus disorder prediction 422 447 - -
Rops7g01557 746 MobiDBLite consensus disorder prediction 612 654 - -
Rops7g01557 746 MobiDBLite consensus disorder prediction 477 498 - -
Rops7g01557 746 MobiDBLite consensus disorder prediction 462 565 - -
Rops7g01557 746 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Rops7g01557 746 MobiDBLite consensus disorder prediction 655 702 - -
Rops7g01557 746 MobiDBLite consensus disorder prediction 717 746 - -
Rops7g01557 746 CDD SMP_SF 95 262 - -
Rops7g01557 746 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Rops7g01557 746 MobiDBLite consensus disorder prediction 539 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01557 Rops-Chr7 23291768 23298021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01557 278 397 Lipid Metabolism Gene Families AT3G61300 32.000 5.40e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01557 7 23291768 23298021 Rops7g01557 7 23291768 23298021 ECH