Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00816 ATGGCTGAGAAAGAGAGTCTGTATTCATTAGGTGATTGGAGGAGAATACCAATTTGCATTTTCTTCAAGGATGCCAGGCTAGTTTTTAAATCAGACAGTCTTGGTAGGGAAATATTGTCAATTGCATTGCCTGCAGCAATGGCTTTGACAGCTGACCCTATTGCTTCACTGGTTGACACTGCATTCATTGGCCAAATAGGTGCAGTGGAGCTCGCTGCTGTAGGAGTTTCAATAGCTCTCTTCAATCAGGCATCAAGGATTGCAATATTTCCACTTGTCAGTGTCACAACCTCTTTTGTGGCCGAGGAAGATACCCTCAGTGGAGCAAGCTCCCATGTAGAGGAGAGTGGATGCTTGGAAGCAGGTTCACCTATGGATGCTGAAACCAAAGAGTTCTTACCACAAAAAGTTACAGATGGAAGCTTTAATAACTCAGATTTGGTTGGTGAAAGCTTTAATATAGTTAAGGAGGAACATAAGAGAAGGCATATCCCTTCAGCTTCATCAGCATTATTTATTGGTGGAATCCTTGGCATCATCCAGGCAATATTACTTATATCTGCAGCAAAACCATTATTAAACTTCATGGGAGTAACTTCTGACTCTCCTATGCTACACCCTGCACAGCAGTACTTGACATTGAGGTCCCTTGGTGCTCCTGCAGTTCTTCTCTCATTAGCAATGCAGGGAGTCTTTCGAGGATTTAAAGACACTAAAACTCCTTTATATGCCACTGTGGCGGGAGATGTGACGAACATAGTACTGGATCCTCTATTCATGTTTCTATTCCGCATGGGTGTCAGTGGTGCAGCCATTGCCCATGTTATATCTCAGTACCTAATTTCAGTTATACTCCTATGGAAGTTGCTGGAACGAGTTGATCTTATACCTCCAAGCATCAAACATTTGCAATTTGACCGATTTCTTAAAAATGGCTTTCTATTATTGATGAGAGTCATTGCTGTAACATTCTGCGTGACACTGGCTGCATCATTAGCAGCACGCCAGGGAACAACATCTATGGCTGCATTTCAAGTCTGTCTGCAGGTTTGGTTGGCTGTGTCTCTTTTAGCTGATGGTCTGGCTGTTGCTGGGCAGGCTATTCTTGCAGGTGCATTTGCTAATAAGGACTATGACAAGGCCACAGCAACTGCATCACGAGTATTGCAGATGGGTTTGGTTCTTGGATTGGCACTTGCTTTCATTCTTGGAACAGGATTGCACTTTGGAGCTAAACTATTTACAAAAGATGTTAATGTCCTCCACCTAATTAGAGTTGGGATCCCGTTTGTTGCACTCACTCAACCCCTGAATTCTTTGGCATTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTTGCATACTCAGCCTTCTCCATGGTTGTGGTGGCAATTGTTAGCATCATTTGTCTACTTATTTTGTCATCTACTGGTGGTTTCATTGGAATTTGGGTTGCTTTGACCATCTATATGGCTCTAAGGGCATTTGCTGGCTTCTTGAGGATTGGTACAGGATCAGGACCGTGGGAGTTCCTTAGGGTCTGA 1548 0.4322 MAEKESLYSLGDWRRIPICIFFKDARLVFKSDSLGREILSIALPAAMALTADPIASLVDTAFIGQIGAVELAAVGVSIALFNQASRIAIFPLVSVTTSFVAEEDTLSGASSHVEESGCLEAGSPMDAETKEFLPQKVTDGSFNNSDLVGESFNIVKEEHKRRHIPSASSALFIGGILGIIQAILLISAAKPLLNFMGVTSDSPMLHPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATVAGDVTNIVLDPLFMFLFRMGVSGAAIAHVISQYLISVILLWKLLERVDLIPPSIKHLQFDRFLKNGFLLLMRVIAVTFCVTLAASLAARQGTTSMAAFQVCLQVWLAVSLLADGLAVAGQAILAGAFANKDYDKATATASRVLQMGLVLGLALAFILGTGLHFGAKLFTKDVNVLHLIRVGIPFVALTQPLNSLAFVFDGVNFGASDFAYSAFSMVVVAIVSIICLLILSSTGGFIGIWVALTIYMALRAFAGFLRIGTGSGPWEFLRV* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00816 515 Pfam MatE 317 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops7g00816 515 Pfam MatE 166 258 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops7g00816 515 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 11 514 IPR044644 -
Rops7g00816 515 NCBIfam MATE family efflux transporter 44 485 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops7g00816 515 CDD MATE_DinF_like 34 505 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00816 Rops-Chr7 10869414 10874642 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00816 7 10869414 10874642 Rops3g02716 3 57571285 57576748 ECH
Rops7g00816 7 10869414 10874642 Rops7g00816 7 10869414 10874642 ECH
Rops7g00816 7 10869414 10874642 Rops3g00733 3 8986931 8992039 PCT