Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00786 ATGGATCCAAACTTTGTTGGAAGCAATTACAAATTCGACGCTGAAGGGAACTTAGTTTTCTTCTCCGATCCAAACGAGTACCTTAACCTTATCAATTTCACGACCAATGATCCTTTGTTTTATCAATCCGATGTGGGACCAAGCACACTTGATTTTGGTTTTGGTTCTTCTCCGAACACAATCATCAACTCCGATGGTGCCATGACCACGGTGGCGGATCCTTCACCGGAAGACACTGATTTTTCTGAAACGGTGAAGTACATAAGCCAGATTCTCATGGAAGAGGATCTTGAGCAGAAGCCATGTATGTGTTATGACCCTTTGAGTCTTCAACACACTGAGAGATCCTTCTATGATGCCCTTGAAGCAAAATTACCCCTTTCACCTAATCAACAGCCTCTTGACATTTTAGAGAGCCCAGATGGGAATTGTTCAGCTACTGATTCTGGAAACAGTGCCAATTCTCAAGATTTGAAGCCTCCTTCACCTGATATTGTTTCTGGTGATTCAGTTTCCCACGTGTCCTCTCAACTTGTTCCTACACATGGGTTGACTAATATTAATGATGGGGTTTTGGATTTGGATTCTTCTGAAACCAAGCTCTTGGCACAAAATATTTTTAGTGATGCAGACTCTATGTTGCAGTTTAGAAGAGGGTTAGAGGAGGCTAGTAAGTTTCTTCCTCAAAGGCCTCAATTTTTCACTGGTTTGGAGAGCAGTTTGGTGTCTCAAGAGCCAAAGGGAGAGGGAACAGTGAAGATGGAGGGTGGTGTTAGGGAGACTTCACAAGGGTTGTTGAAGAGTAGAAAGAATCATGAGCGCCGAGGTAGTGATGATGATGAAGAAAGAAGAAGCAACAAGCAATCTGCAGTTTGTGTTGAGGAGGAGAGTGAATTATCTGAAATGTTTGATAAGGTGTTGCTTAGTGTTGAAAATGTGCCACTTGGTGCTGAACAGCAAAATGGATCAGTCATAGAGAGAAACACACAGCAAGGGGAACGAACAAAGTCATCTGATGGAGGGAGGACTCGTTCCAAGAAACAAGGAAGGAAGAAAGAAACGGTGGATTTGAGGACCCTTTTGATTCAATGTGCACAAGCTGTGTCTGCCACTGACAACAGGACTGCTAATGAACTGTTAAAGCAGATTAGGCAGCATTCTTCTCCCTCAGGTGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGGACTAGAGGCACGCTTGGTTGGTGCTGGTACTGGAACCCAAATCTTTTATATGAACCACAAGAAGTTCACTGCTGCTGATTACCTCAAAGCTTACCAAGTTTTTATATCTGCTATCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAAATGATTATGAAAACAGCTGAAAAGGCAGAAACCCTTCATATTATTGATTTCGGTATCCTTTATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTGTCAAAAAGAGATGGTGGACCTCCCAAGCTACACATGACAGGAATAGACTATCCCCAACCTGGCTTTCGTCCAGTAGAATGCATTGAGGAAACTGGTAGACGTCTAGCTAAATATTGCCAGCGTTTCAATGTTCCCTTTGAGTACAAGGCCATAGCATCACGAAACTGGGAAACCATTCCGATTGAAGACCTTCAAATTAAGAGCAATGAGGTACTTGCTGTGAACTGTCTGATGAGGTTTAAGAATTTGCTTGATGAGACAATTGAAGTGAATAGTCCTAGAAATGCAGTTCTGAAGTTAATCAGGAAGATAAATCCGGATATTTTTGTTCAATCCATAGTAAATGGGGCTTATAATGCACCTTTCTTTGTCACACGCTTCAGGGAGGCACTGTTCCATTATTCTGCAAGTTATGATATGCATGATACTCTCATACCCCGTGCAAATGAATGGAGGTTGATGGCTGAGAGAGAGTTTGTGGGTCGGGAGATTATGAATGTTGTTGCATGTGAAGGTTATGAGAGGTTAGAGAGGCCTGAGACATACAAACAATGGCAGGCTAGGAATTCAAGGGCTGGTTTTAGGCAGCTCCCACTAGATAAGGAGCTAATGACCAAATTTAGAGATAAGCTAAGAGAATGGTACAAGCACCTCAGAGATTTTGACTTTGATGAAGATAAGAACTGGATGCTTCAAGGTTGGAAGGGTCGCATTTTGTATGCTTCCTCTTGTTGGGTGCCAGCATAA 2205 0.4227 MDPNFVGSNYKFDAEGNLVFFSDPNEYLNLINFTTNDPLFYQSDVGPSTLDFGFGSSPNTIINSDGAMTTVADPSPEDTDFSETVKYISQILMEEDLEQKPCMCYDPLSLQHTERSFYDALEAKLPLSPNQQPLDILESPDGNCSATDSGNSANSQDLKPPSPDIVSGDSVSHVSSQLVPTHGLTNINDGVLDLDSSETKLLAQNIFSDADSMLQFRRGLEEASKFLPQRPQFFTGLESSLVSQEPKGEGTVKMEGGVRETSQGLLKSRKNHERRGSDDDEERRSNKQSAVCVEEESELSEMFDKVLLSVENVPLGAEQQNGSVIERNTQQGERTKSSDGGRTRSKKQGRKKETVDLRTLLIQCAQAVSATDNRTANELLKQIRQHSSPSGDASQRLAHYFANGLEARLVGAGTGTQIFYMNHKKFTAADYLKAYQVFISAIPFKKFAHFFANKMIMKTAEKAETLHIIDFGILYGFQWPILIKFLSKRDGGPPKLHMTGIDYPQPGFRPVECIEETGRRLAKYCQRFNVPFEYKAIASRNWETIPIEDLQIKSNEVLAVNCLMRFKNLLDETIEVNSPRNAVLKLIRKINPDIFVQSIVNGAYNAPFFVTRFREALFHYSASYDMHDTLIPRANEWRLMAEREFVGREIMNVVACEGYERLERPETYKQWQARNSRAGFRQLPLDKELMTKFRDKLREWYKHLRDFDFDEDKNWMLQGWKGRILYASSCWVPA* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00786 734 Pfam GRAS domain family 357 731 IPR005202 -
Rops7g00786 734 MobiDBLite consensus disorder prediction 337 352 - -
Rops7g00786 734 MobiDBLite consensus disorder prediction 318 336 - -
Rops7g00786 734 MobiDBLite consensus disorder prediction 318 352 - -
Rops7g00786 734 ProSiteProfiles GRAS family profile. 348 732 IPR005202 -
Rops7g00786 734 MobiDBLite consensus disorder prediction 130 174 - -
Rops7g00786 734 MobiDBLite consensus disorder prediction 265 291 - -
Rops7g00786 734 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 296 727 IPR005202 -
Rops7g00786 734 MobiDBLite consensus disorder prediction 132 161 - -
Rops7g00786 734 MobiDBLite consensus disorder prediction 241 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00786 Rops-Chr7 10605374 10607578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00786 84 734 GRAS Transcription Factor Family AT1G07530 52.006 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops7g00786 GRAS 1.2e-111 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00786 7 10605374 10607578 Rops7g00786 7 10605374 10607578 ECH
Rops7g00786 7 10605374 10607578 Rops3g00791 3 9664305 9667739 PCT
Rops3g00790 3 9657370 9660120 Rops7g00786 7 10605374 10607578 PCT