Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00711 ATGATGGATCCTTCTAGTGGACAACCCCAGCAAATGTCTAGCCAGTCACTGGAGAACATGTTAGGTTGCTCAAAAGCACAGCAGGATAAGAAGCCAAGACCTCAGCCAGAACAAGCTCTGAAATGCCCAAGATGTGATTCCACCAACACAAAATTTTGTTACTACAACAATTATAGTCTGTCTCAGCCAAGATATTTCTGCAAGTCTTGCAGGAGATATTGGACCAAAGGAGGAACACTGAGGAGTGTCCCAGTGGGAGGAGGGTGCAGGAAGAACAAGAGGTCATCATCTTCATCATCAAAGAGGGCTCAGGATCAAACATTCGCACCCAATCACAACCCACTCACCAGCCTCCCTCATTCATCTTATGATTCCAACGACTTCAACCTAGCATTAGCTAGGCTCCAAAAACAATCATGTGGGCAATTGGGATATGATAACCATGATCTTTCAACTTTGGGGAACCCCACAAGCTCATTTTGTGATATTCTTGGCAATTCAGGCATGAACCCGTCTTCAACAAACCCTGGATTCTTGGACGCACTTAGAACTGGGTTCCTCGGAACTGGAACCCCTGGAACCCAGTATAATAATGTTCAGAATATGTACTGTGTGTATGGAAATGGGGACACTGGGGACGTGGATAGCAGTGGAAATTCTTGTGGGGTTGGGGTTAATGGAGAGATGATGCTTCCTTATGATCAAGAAATGAGCAATGCAGCTACTCAATCAGTGAATGTCACTACCATGAAGCAAGAACTGTTCAGTGGCAGGGAACAAAGTGAAAGGAGTAAGGTGTTGGGGGGTTTCCCATGGCAGCTAAATGGAGGCTCAACCATGGCTGAACTTGATTCAGGGAGAGCAAATTGGAACGGTTTCACATCTTCTTGGCATGGACTTCTCCATAGTCCCCTGATGTAG 921 0.4582 MMDPSSGQPQQMSSQSLENMLGCSKAQQDKKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRSVPVGGGCRKNKRSSSSSSKRAQDQTFAPNHNPLTSLPHSSYDSNDFNLALARLQKQSCGQLGYDNHDLSTLGNPTSSFCDILGNSGMNPSSTNPGFLDALRTGFLGTGTPGTQYNNVQNMYCVYGNGDTGDVDSSGNSCGVGVNGEMMLPYDQEMSNAATQSVNVTTMKQELFSGREQSERSKVLGGFPWQLNGGSTMAELDSGRANWNGFTSSWHGLLHSPLM* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00711 306 MobiDBLite consensus disorder prediction 85 120 - -
Rops7g00711 306 MobiDBLite consensus disorder prediction 91 120 - -
Rops7g00711 306 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Rops7g00711 306 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 201 IPR045174 GO:0003700|GO:0006355
Rops7g00711 306 MobiDBLite consensus disorder prediction 1 23 - -
Rops7g00711 306 MobiDBLite consensus disorder prediction 1 41 - -
Rops7g00711 306 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Rops7g00711 306 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00711 Rops-Chr7 9416969 9418853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00711 38 306 C2C2-Dof Transcription Factor Family AT2G28510 41.754 1.01e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops7g00711 zf-Dof 1.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00711 - - gmx:778104 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00711 7 9416969 9418853 Rops7g00711 7 9416969 9418853 ECH
Rops7g00711 7 9416969 9418853 Rops3g00895 3 11450030 11451975 PCT