Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00440 ATGGGCGAAATAGAAGAAATTGGAGCAGACGTTTGTTCAGATATAGAAGTTGATGATATTAGATGCCATAACATAGCAGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGAATTGGAGAGAAGGATGTGGAAGGATCGTATCAAACACAAAAGGCTCAAGGAAAAACAGAAGCTTGCTGCACAGCAAGCTGCAGAGAAGCAAAAGCCCAGGCAGTCCAGTGATCAAGCTCGTAGGAAGAAAATGTCCAGAGCACAAGATGGGATTCTTAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGGGGATTTGTGTATGGAATCATTCCTGAGAAGGGAAAGCCGGTTAGTGGTTCCTCGGATAATATTAGAGCTTGGTGGAAAGAAAAGGTAAAGTTTGATAAGAATGGCCCTGCAGCCATAGCCAAGTATGAAGCAGAGTGTCTAGCTATGAGTGAGGCCGATAATAACCGAAATGGGAACTCTCAGAGCATTCTCCAGGACCTGCAAGATGCAACGCTTGGATCACTCTTATCTTCTTTGATGCAACATTGTGATCCTCCGCAGAGGAAGTATCCATTAGAAAAGGGTATTCCCCCACCTTGGTGGCCAACTGGGAATGAAGATTGGTGGCCAAGTTTGAGTTTACCTCCTGGTCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTGACTGCTGTTATAAAGCACATGTCACCTGATATTGCAAAAATAAGGAGGCATATCCGGCAATCAAAATGCTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTTTTAAGTCGAGAAGAAGCTCTAATTAGGCAGCCTAGTAGTGATAATGGGACATCTGGAATAACTGAAACACCACCCGGTGCTCCTGTTGAAAATAAGCAAGCTGCTGCCAGTAGTGCTAGCAACTATGATGTTGATGGTGCTGATGATGGCATTGGTTCTGTTTCTTCTAAAGAAGATAGGGGGAATCAGTTGATGGATACAGAACCGTCAGATGACTTGCGAAGGAATTCTGTCCAAGATACAGATCAAGCTAAGAAGCAACCCAAGAGAAAAAGACTTCGTTTGAGGTCAAGCACAACTGACAAACCACCATCACAATCTGACAATGAAATAGTGCATGTTGAGCCTAGAAACAAACTGCCTAATATGAACCAGACACAAGCACCGGAAGTTGGACTCCAGATTCATGGAAATGAACAGGGCAATGAGACTGATCCTGCTTTGGGACCACTGGAAAAAGGACTTGAGGTTCCAGCTCAACTACCAACACCTGATCTTGATCATTATTCTTATCTACATGCGAACAACTTAGTTTCCGCAGAAAACATGTATATGAATGGAAGGCCATTGCACTATCCTGAGTTGCAAAACCCTAACATGCATCATGAAACTACTTACAATCTTTATAATCCAGTGGCGGGATACGGGCCTAGTCAGGATGGGCAGCAGCTGCAGCCTGGGAACAGTCATCCAATTAGGCCAGAGAATGATGCAGTCTCTATTCCAGCAGTACATATGAAAGGGGATGAAATTACTGGAGGAGACTTGCATTATTTTGGTAAAGACGCATTCCAAAATGAGCTAGATAGGCCTATAGATCACTCTTTCTTTGGATCACCACTCAATAGCATTACTTTGGAGCATAGATTATTGGAACTAGTGACTCAGCAGAGACTGAACTACAAAACTTCCAAATTGGTATCAGTGTTTATGCAGTTTGGGGTTGAAAGATACAATCTTAACATTGACAAGTCAACTTGA 1821 0.4311 MGEIEEIGADVCSDIEVDDIRCHNIAEKDVSDEEIEAEELERRMWKDRIKHKRLKEKQKLAAQQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNNRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGNEDWWPSLSLPPGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHIRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGTSGITETPPGAPVENKQAAASSASNYDVDGADDGIGSVSSKEDRGNQLMDTEPSDDLRRNSVQDTDQAKKQPKRKRLRLRSSTTDKPPSQSDNEIVHVEPRNKLPNMNQTQAPEVGLQIHGNEQGNETDPALGPLEKGLEVPAQLPTPDLDHYSYLHANNLVSAENMYMNGRPLHYPELQNPNMHHETTYNLYNPVAGYGPSQDGQQLQPGNSHPIRPENDAVSIPAVHMKGDEITGGDLHYFGKDAFQNELDRPIDHSFFGSPLNSITLEHRLLELVTQQRLNYKTSKLVSVFMQFGVERYNLNIDKST* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00440 606 MobiDBLite consensus disorder prediction 288 304 - -
Rops7g00440 606 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Rops7g00440 606 Pfam Ethylene insensitive 3 38 285 IPR047091 GO:0003700
Rops7g00440 606 Gene3D - 158 296 IPR023278 GO:0003700|GO:0005634
Rops7g00440 606 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Rops7g00440 606 MobiDBLite consensus disorder prediction 341 367 - -
Rops7g00440 606 MobiDBLite consensus disorder prediction 288 393 - -
Rops7g00440 606 MobiDBLite consensus disorder prediction 56 83 - -
Rops7g00440 606 Coils Coil 23 57 - -
Rops7g00440 606 FunFam Ethylene insensitive 3-like 1 159 295 - -
Rops7g00440 606 FunFam Ethylene insensitive 3-like 1 72 150 - -
Rops7g00440 606 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 549 IPR006957 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00440 Rops-Chr7 5499929 5502556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00440 16 500 EIL Transcription Factor Family AT1G73730 61.303 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops7g00440 EIN3 1.8e-125 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00440 7 5499929 5502556 Rops7g00440 7 5499929 5502556 ECH