Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00068 ATGAATCACCGACAACATCGTTCCTCGTTAACTCTAAGGGAGTTTGATTACTGCCTTCAACGATTGGCCATACACCAAAACTCAATCTTTGACCTTGTCGAGGGATTTCCCAAGATTGAAGTATTGGTTGGAAATGCCCAGAATACTACTTCTGATGTCTTAAAAGAACAAGGGGCTCAAAATATTACAGTTAAAGCTGGGGGAGGAAAAGAGCAGAACATTTCAGAGTCAGTGGTAGATAAGGTTTTGGGAGACAAAGATCAAAATGGTATGCCTGGGATTTTCCAAGAACCACCTCAGACACAAACAATCTCAGATGTTGGTCCAAAGAATCATTCATTTGAAGACCAGAGGAATGATCCATTCATATCTACTAATAGCATTGCTAATGACCAACTCCTTGATGGACTCCTACTTTCCACATTTGATAAAGCATCGTGCTTAAGCAGGTACCAATCTCACTTATACCGCAAACCTTCCCCTCATAAACCTTCTGCATATCTGATATCCAAGCTACGCAACTATGAACGTTACCATAGAAGTTGTGGACCTCAAACCAAATCCTACAACAAAATCATGATAAAGGGCAAAAAATTTAGCAAAAAAGGTGCATACAAGTGCAAATACCTTGTCTGGACAGCTTCCAATGGCCTAGGGAACAGAATGATTAGCTTGGCTGCAGCATTCCTGTATGCTATCCTTACAGACCGTGTTCTACTTGTCAGATTTGGGAGTGATATGTTTGGTCTCTTTTGCGAGCCATTTCCTAATTCCTCATGGTTATTGCCCAAGAGTTTTCCTTATTGGAAAGATCAGAAACATCTTGAAACATATGAAAGCATTCTAACGAACTATAAGAGAAACATTTCACAGGAGATCTTGCCACCATTTCTTATTCTTAATCTACAACACACCCATGATGGTCACAATAACTTTTTTCATTGTGATCAAAGTCAAGGTCTTCTCCAGAAAGTTCCTGTGCTAATTTTGCGGTCGGATCAATATTTCGTCCCTTCTCTTTTCATGATTCCATCATTTAGAAAAGATCTAAGCAAGATGTTCCCTGAGAAAGACACTGTTTTTCACCATCTGGGACGTTACCTTTTTCATCCATCAAATGAGGCATGGGAACTAATCAGCAGGTTCTATGAGGCGCACTTAGCCAAGGCAAATGAGAGGATTGGCCTGCAGATTAGAGTATTTAATACTCACAAAGCACCACATCAAACCATTATCAATGAAATTATAGCCTGCACCCTTCAGCATAAGCTGCTGCCTGAATTAGACATGCACAAGTCAGCAAGTTCTCCTTCTAAGAAACAGACATCAAAAGCTGTTCTAGTAGCATCTTTATATTCAGAATATGGTGAGAAGTTGAGGGCTATGTATCTGACAAATACAACTGTGACTGGGGAAGTGATAGAAGTTTATCAGCCAAGTCATGAAGAGCGTCAAAAGTCATATAATGATATGCACAATATTAAGGCATGGACTGAAATATATTTGCTGAGTTTGTGTGATGCATTAATTACGAGCTCCAAGTCTACTTTTGGGTATGTTGCTCAAAGTCTCGGAGGTTTGAAGCCATGGATTCTGCCCAGGGCATATGGGGAAACCATCCCAAATCTACCTTGTCAACGAGCGATGTCCATGGAACCTTGTTTCCATTATCCTCCCAAGTATGACTGCATGGCCAATAGAACAGTTGATTTTACATCCCTTTTTCCTCACATGAAACATTGTGAAGATTGGACTCGTGGATTGAGGCTGGTTAATGCTAATGGCTAG 1788 0.4038 MNHRQHRSSLTLREFDYCLQRLAIHQNSIFDLVEGFPKIEVLVGNAQNTTSDVLKEQGAQNITVKAGGGKEQNISESVVDKVLGDKDQNGMPGIFQEPPQTQTISDVGPKNHSFEDQRNDPFISTNSIANDQLLDGLLLSTFDKASCLSRYQSHLYRKPSPHKPSAYLISKLRNYERYHRSCGPQTKSYNKIMIKGKKFSKKGAYKCKYLVWTASNGLGNRMISLAAAFLYAILTDRVLLVRFGSDMFGLFCEPFPNSSWLLPKSFPYWKDQKHLETYESILTNYKRNISQEILPPFLILNLQHTHDGHNNFFHCDQSQGLLQKVPVLILRSDQYFVPSLFMIPSFRKDLSKMFPEKDTVFHHLGRYLFHPSNEAWELISRFYEAHLAKANERIGLQIRVFNTHKAPHQTIINEIIACTLQHKLLPELDMHKSASSPSKKQTSKAVLVASLYSEYGEKLRAMYLTNTTVTGEVIEVYQPSHEERQKSYNDMHNIKAWTEIYLLSLCDALITSSKSTFGYVAQSLGGLKPWILPRAYGETIPNLPCQRAMSMEPCFHYPPKYDCMANRTVDFTSLFPHMKHCEDWTRGLRLVNANG* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00068 595 PANTHER FUCOSYLTRANSFERASE 2-RELATED 114 592 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops7g00068 595 FunFam Galactoside 2-alpha-L-fucosyltransferase 205 256 - -
Rops7g00068 595 FunFam Galactoside 2-alpha-L-fucosyltransferase 377 531 - -
Rops7g00068 595 Pfam Xyloglucan fucosyltransferase 126 563 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops7g00068 595 Gene3D - 205 274 - -
Rops7g00068 595 Gene3D - 376 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00068 Rops-Chr7 958611 962347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00068 122 591 Xyloglucan Fucosyltransferase1 AT2G03220 52.643 6.17e-172 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00068 K13681 - gmx:100799776 813.142