Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00067 ATGGATTGTTTGGGGTTGAGTTCCATAGGGATCAGAGCTTACTTGGTCATTTTTGCCATAACTTTCTCTCCACTCATATTAACGCTCACCTTAAATTCTGCTCAGTTTGAGTGGTTTTCAAAAGGTTCAAAATATAATTCATTTACAAGCTCAACAAATGATTCCTCCCAACTTACAAGAAATCATGCTGACGAACTCCTTGATGGACTTATCCCTTCTGGGTTTGATGAAGGTTCATGCTTAAGCAGATTCCAGTCCCACTTTTATCGTAAAGCATCCCCTCATAAACCCTCTCCCTTTCTCATATCTAAACTAAGCAACTATGAAGATCTTCACAAAAGTTGTGGACCTCATACTAGATCTTACAACAGAACCATGGAAATGCTCGAAAGATTTACGACCAATCTTACTACTGAATGTAACTACATTATCTGGACCCCTGTCAATGGCTTAGGGAACAAAATGGTGAGCATGGCTGCAGCATTCCTTTATGCACTCCTCACGGATAGAGTCCTACTTGTGGAATTTCAGGATGATATGGTTGGTCTATTTTGTGAACCATTCCCTAATTCATCATGGATATTGCCCAAAAATTTTCCCTTCAGTAATGACCAAGGACATGTTGTAACATATCAAAAGGACTGGGAAAACATTTCCAAGGAGATTTTACCATCTGTTCTACATCTGGAGATACACCACACCATTGATGATCCTGAAAGGTTTTTCCACTGTGATCATAGCCAACATCTTCTCCTAAAGGTTCCCCTCTTGATTTTGCTCTCTGATCAATATTTTGTACCTTCTCTTTTTATGGTTCCATCCTTCAGCCAAGAGCTAAACAAAATGTTCCCAGAGAGAGACAGTGTTTTCCACCATTTGGGACGTTACCTCTTTCACCCTTCAAATGAGGTGTGGGGACTAATCACCAGATTCTATCAAGCATATTTGGCCAAGGCAGATGAGAGGATTGGCCTCCAAATAAGAGTGTTTGATCCTGATCACACTACATATCAAACAATCATGAATCAAGTTTTAAACTGCACCATAAAGCATAAGATACTACCTGATTTTACAATGGAACTTTCAAAAGATTCTCCATGGAAGAAAAATCAGACTTTGAAGTCTGTTCTGATAGCATCTTTGTATCCAGAATATGGTGAGAACCTTAGGACTATGTATTTGACAAAGCCAACCGTTACTGGGGAGATTATAGGAGTTTATCAGCCAAGTCATGAGAACTCTTTTTCGACTTTTGGGTATATGGCTCAGAGTTTGAGAGGGCTGAAGCCATGGGTTCTTTACAATTACAAATTACCAGATGAGAACGTCCCAGACCCACCCTGTGAGAGAGACTTCTCTATGGAACCTTGTTTTCATCTTCCTCCTACACTTGATTGCATGGAAAAGCCCATAGATGATATTGGTGCAGTTTTTCCTTATATTAGAAGATGCTGGATCGCTTCTCTAACAGGTGTGATTCTTGCTGAAGCGATCTCTCAACAGCAGAAATTCATATCATACATTCAAGCAACTATGGGTATCATCAGGAGTTGCTTCTCTTTCATATCAGGGACTGTCTGTGGGGTTTACTTGGCTCAGAATTATCAAGTTCCTAACATCGTGAAGCTAGCTGACACTGCCTTGTTCATGGCCAAAATTGTTGAGGAAAAATACCGCAAGCCCAAGAAGAGGGATGACAATGATGATTAG 1710 0.4018 MDCLGLSSIGIRAYLVIFAITFSPLILTLTLNSAQFEWFSKGSKYNSFTSSTNDSSQLTRNHADELLDGLIPSGFDEGSCLSRFQSHFYRKASPHKPSPFLISKLSNYEDLHKSCGPHTRSYNRTMEMLERFTTNLTTECNYIIWTPVNGLGNKMVSMAAAFLYALLTDRVLLVEFQDDMVGLFCEPFPNSSWILPKNFPFSNDQGHVVTYQKDWENISKEILPSVLHLEIHHTIDDPERFFHCDHSQHLLLKVPLLILLSDQYFVPSLFMVPSFSQELNKMFPERDSVFHHLGRYLFHPSNEVWGLITRFYQAYLAKADERIGLQIRVFDPDHTTYQTIMNQVLNCTIKHKILPDFTMELSKDSPWKKNQTLKSVLIASLYPEYGENLRTMYLTKPTVTGEIIGVYQPSHENSFSTFGYMAQSLRGLKPWVLYNYKLPDENVPDPPCERDFSMEPCFHLPPTLDCMEKPIDDIGAVFPYIRRCWIASLTGVILAEAISQQQKFISYIQATMGIIRSCFSFISGTVCGVYLAQNYQVPNIVKLADTALFMAKIVEEKYRKPKKRDDNDD* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00067 569 PANTHER FUCOSYLTRANSFERASE 2-RELATED 415 485 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops7g00067 569 Pfam Domain of unknown function (DUF4535) 517 561 IPR027854 -
Rops7g00067 569 Pfam Xyloglucan fucosyltransferase 52 413 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops7g00067 569 Pfam Xyloglucan fucosyltransferase 414 466 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops7g00067 569 FunFam Galactoside 2-alpha-L-fucosyltransferase 138 189 - -
Rops7g00067 569 Gene3D - 137 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00067 Rops-Chr7 944377 949719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00067 58 484 Xyloglucan Fucosyltransferase1 AT2G03220 47.312 3.16e-147 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00067 K13681 - gmx:100818288 527.324