Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03353 ATGGGAAGCCACGGCTCATCATTCTCAAGTTTCCGCGCCTACCTCCGAGCCGTCGCTAACACTCCCTCCCGGCTCGCGCGCCGAGCCGTTTCCGTCTCCACCTCTTACGAAGAGATGAGCCGGGTTCGTGCCCGGTCCGGTTCAAGCATGCGCAAGACCCTCCGTTGGTTCGACCTCGTTGGCTTAGGCATCGGCGGAATGGTCGGCGCCGGCGTTTTTGTCGTCACCGGTCACGCCAGCCGCACTTACGCCGGACCCGCCGTTGTCTTATCCTACGCCATTGCCGGACTCTGCGCCCTCCTCTCCGCTTTCTGCTACACTGAGTTCGCCGTTGACATGCCAGTCGCCGGCGGCGCCTTCAGCTACCTCCGTGTCACCTTCGGTGAATTCGCTGCATTTCTCACCGGCGCGAACCTCGTGATGGACTATGTTTTATCCAATGCCGCCGTGGCAAGAGGCTTCACGGCGTACTTCGGCACCGCAATCGGCATATCCTCCGCGAAATGGAGACTTGCGTTGCCTTCTCTTCCTAAAGGCTTCAACGAAATAGACATCGTTGCAGTTGCGGTTGTTTTGCTCATCACACTTGTTATCTGTTACAGCACAAGGGAGAGTTCTGTTGTGAACATGATATTAACAGCACTGCATATATTGTTCATTGCTTTCGTGATAATGATAGGGTTTTGGAAAGGTAGTTGGAGCAATTTCACGAAACCAGGTAACCCGGAGAATCCATCGGGTTTCTTCCCATATGGAGCAGCCGGTGTGTTCAACGGTGCAGCTATGGTTTACCTGAGTTATATAGGATACGACGCCGTTTCGACAATGGCGGAGGAAGTGAAGGATCCCGTGAAGGATATTCCGGTGGGCGTTTCGGGATCGGTTATTATTGTTACCATTATGTATTGTTTGATGGCAGCTTCAATGTCAAAGCTTCTCCCTTACGATATGATCGATGCAGAAGCACCGTTTTCGGCGGCGTTCAATGGGAAATCGGACGGTTGGGGATGGGTGCCTCGGGTGATAGGAGTGGGGGCCAGTTTTGGGATACTAACGTCGCTGTTAGTGGCGATGTTGGGTCAGGCTCGTTACATGTGCGTCATCGGACGGTCCAACGTGGTCCCTTCTTGGTTCGCTAGGGTCCACCCAAGGACTTCCACCCCTGTCAACGCCTCCGCTTTTCTTGGGATCTTCACAGCAGCAATTGCCCTTTTCACTGACCTTGATGTCCTCCTCAATCTGGTGTCCATTGGCACCCTCTTTGTCTTTTACATGGTGGCAAATGCCGTGATCTACAGACGTTACGTTGCTAGGGGGACAACCAATCCATGGCCTACATTGTCCTTCCTCTGCTCATTTTCCTTTACCTCCTTCATGTTCACCCTTATTTGGAAATTTGTACCCACTGGGAATGCAAAGGCTGGGATGCTCAGTGTTTGTGGTGTGATTGCGGTTGCAATATTACAACTTTTCCATTGCATGGTCCCTCAAGCTCGAAAGCCAGAATTCTGGGGTGTCCCACTCATGCCATGGATACCCTCCATATCAATCTTTCTGAATGTGTTTTTGCTGGGATCATTGGATGGACCATCCTATATTAGATTTGGATTCTTTTCTGCTGTTGCGATTCTCTTCTATGTCTTTTACAGCGTTCATGCTAGCTTTGATGCTGAAGGAGATGATTCTCTCGGTCAAAAGAATGTTGAAATCCACACAGAATCAAAAGAATGTGAGGACCAAAGTTTCAAAGTGTAG 1755 0.51 MGSHGSSFSSFRAYLRAVANTPSRLARRAVSVSTSYEEMSRVRARSGSSMRKTLRWFDLVGLGIGGMVGAGVFVVTGHASRTYAGPAVVLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFLTGANLVMDYVLSNAAVARGFTAYFGTAIGISSAKWRLALPSLPKGFNEIDIVAVAVVLLITLVICYSTRESSVVNMILTALHILFIAFVIMIGFWKGSWSNFTKPGNPENPSGFFPYGAAGVFNGAAMVYLSYIGYDAVSTMAEEVKDPVKDIPVGVSGSVIIVTIMYCLMAASMSKLLPYDMIDAEAPFSAAFNGKSDGWGWVPRVIGVGASFGILTSLLVAMLGQARYMCVIGRSNVVPSWFARVHPRTSTPVNASAFLGIFTAAIALFTDLDVLLNLVSIGTLFVFYMVANAVIYRRYVARGTTNPWPTLSFLCSFSFTSFMFTLIWKFVPTGNAKAGMLSVCGVIAVAILQLFHCMVPQARKPEFWGVPLMPWIPSISIFLNVFLLGSLDGPSYIRFGFFSAVAILFYVFYSVHASFDAEGDDSLGQKNVEIHTESKECEDQSFKV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03353 584 Pfam Amino acid permease 54 477 IPR002293 GO:0016020|GO:0022857|GO:0055085
Rops6g03353 584 PIRSF AA_transporter 36 498 - -
Rops6g03353 584 PIRSF AA_transporter 494 572 - -
Rops6g03353 584 Gene3D Amino acid/polyamine transporter I 49 488 - -
Rops6g03353 584 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 29 554 - -
Rops6g03353 584 Pfam C-terminus of AA_permease 504 554 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03353 Rops-Chr6 58019203 58022956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03353 141 569 Organic Solute Cotransporters AT3G10600 75.758 0.0 672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03353 6 58019203 58022956 Rops6g03353 6 58019203 58022956 ECH