Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03327 ATGGCTACTCTCACCTCAAGTCTAAGCCTTAGCCCACAATACACTAGTAAAGACTATCAACATCATGGTTCTGTGGTTGAGGAAATTAAAGGGCTTATTAGAGTTCACAAAGATGGATATGTGGAACGACCCCAGATTGTTCCATGTGTCACTACTGCTTTGAGTCCAGAGCTGAATGTGACTTCTAGAGACATGGTCATTGACACTGTTACAAACACTTGGGCTCGTTTCTATGTTCCAATTTGCCAAAAAAAGCTACCTTTGTTGGTCTATTTTCATGGGGGTGGCTTTTGTGTTGGCTCTGCAGCTTGGAGTTGCTACCATGATTTCCTAGCTAGGCTATCTGCTAAAGTGGGGTGCTTGATTATGTCGGTGAACTATAGATTAGCCCCAGAGGACCCTCTTCCTGCTCCCTATGATGATGGGTTAAAGGCCTTAATGTGGGTGAAACAACAAATGCTATATCAATATGAGACCACCGAATGGTGGACTAGAAAATGCAACTTCTCTAGTGTCTTCTTGGGAGGGGATAGTGCAGGTGCTAACATAGCCTACAACGTTGCAACAAGGCTAGCTGCATGTGAAAGTGCTGCTTTAAGGCCTTTAAATTTGAAGGGTCTCATTTTGATACAACCCTTTTTTGGTGGAGAAGTGAGAATGGTTTCAGAGAAATGCATGGCCCAATCACCGGGTTCTGCTTTGAACTTGGCAGCATCTGATACTTATTGGCGCTTATCATTACCATCTGGTGCGAACCGTGACCATCCATGGTGCAATCCTTTGGTGAAAGGGTCAATGAAATTGGAGGAATTGAAGCTCTTGCCTACCTTGGTTTGCATCTCAGAGATGGACATATTGAAGGATAGGAACTTGGAGTTGTGTGATGCTCTGGCAAGAGCAGGTAAAAGAGTTGAGTATGCGGTGTTCAAAGGTGTTGGACATGCATTTCAGATTCTAAACAAATCTCAGCTCTCACAGACCAGAGCCCATGAAATGATGGCTCGTGTCAAGTCTTTCATGTGTCTCTGA 1029 0.4412 MATLTSSLSLSPQYTSKDYQHHGSVVEEIKGLIRVHKDGYVERPQIVPCVTTALSPELNVTSRDMVIDTVTNTWARFYVPICQKKLPLLVYFHGGGFCVGSAAWSCYHDFLARLSAKVGCLIMSVNYRLAPEDPLPAPYDDGLKALMWVKQQMLYQYETTEWWTRKCNFSSVFLGGDSAGANIAYNVATRLAACESAALRPLNLKGLILIQPFFGGEVRMVSEKCMAQSPGSALNLAASDTYWRLSLPSGANRDHPWCNPLVKGSMKLEELKLLPTLVCISEMDILKDRNLELCDALARAGKRVEYAVFKGVGHAFQILNKSQLSQTRAHEMMARVKSFMCL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03327 342 SUPERFAMILY alpha/beta-Hydrolases 23 340 IPR029058 -
Rops6g03327 342 Gene3D alpha/beta hydrolase 17 341 IPR029058 -
Rops6g03327 342 Pfam alpha/beta hydrolase fold 89 317 IPR013094 GO:0016787
Rops6g03327 342 PANTHER ARYLACETAMIDE DEACETYLASE 27 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03327 Rops-Chr6 57746473 57747638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03327 6 340 Carbohydrate Esterase AT5G16080 52.738 8.83e-123 355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03327 6 57746473 57747638 Rops6g03327 6 57746473 57747638 ECH