Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03326 ATGGTCTTAGGGTTTTCAATCTCGCTAAATCGAAAGGAATCGACACTTTCCCAGGAACAGAAATATTGGGAACAAAACAAAATGTCTATGGCTGATGAACCACTATATCCAATAGCGGTGCTTATAGACGAGCTGAAAAATGATGACATTCAGCTTCGGTTGAACTCGATTCGCAGGATTTCAACGATTGCACGTGCTCTTGGGGAGGAACGAACGCGTAAAGAATTAATTCCATTTTTGAGTGAAAATAATGATGATGATGATGAGGTACTTCTTGCAATGGCAGAAGAGTTGGGTGTGTTCATTCCTTATGTTGGGGGAGTGGAACATGCCAGTGTGTTGCTCCCACCTCTGGAGACACTTTGCAGTGTTGAGGAAACCTGTGTGAGAGATAAAGCTGTGGAGTCACTTTGCAGAATAGGATCTCAAATGAGGGAGAGTGATTTGATTGAATATTTCATCCCATTGGTAAAGAGATTGGCAGCAGGTGAATGGTTTACTGCCCGAGTCTCTGCGTGTGGACTATTCCATATTGCATACTCGAGTGCACCAGAAACATCAAAGACAGAGTTAAGGTCAATATACAGTCAGTTGTGTCAGGATGACATGCCTATGGTTAGAAGGTCTGCTGCATCAAATCTTGGGAAATTTGCTGCAACTGTTGAATATACTCATTTGAAGGCAGACATCATGTCAATTTTTGAGGATCTTACTCAGGATGATCAAGATTCTGTCAGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGATTGCGTTGCACATATACTCCCAGTCATTGTTAATTTCTCCCAGGATAAGTCTTGGCGTGTGCGTTACATGGTTGCAAATCAATTGTATGAGCTCTGTGAAGCTGTAGGCCCTGAACCTACCAGAACGGAATTGGTCCCTGCCTATGTGCGGTTGCTTCGCGATAATGAGGCTGAAGTACGCATAGCAGCTGCTGGAAAAGTGACCAAGTTTTGCCGGATTTTAAATCCAGATCTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGAATTGTCATCAGATTCTTCACAGCATGTCCGCTCTGCTTTGGCTTCAGTAATAATGGGAATGGCTCCAGTGTTGGGGAAGGAAGCAACGATTGAGCAGCTTCTTCCTATTTTCCTTTCCCTTTTGAAGGATGAATTTCCTGATGTGCGCCTAAACATCATCAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATTGATCTGTTATCTCAATCTTTATTACCTGCTATTGTTGAGCTTGCTGAGGATAGGCATTGGAGGGTTCGGCTCGCAATCATAGAGTATATACCCTTATTGGCAAGTCAATTGGGTGTTGGGTTTTTCGACGACAAGCTTGGTGCTCTTTGCATGCAGTGGTTACAGGATAAGGTTCATTCAATTCGTGAAGCAGCTGCCAACAACTTGAAACGCCTTGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAGCACATAATTCCACAGGTTTTGGAGATGATTAGCAATCCACACTATTTGTATCGGATGACCATTCTTCGAGCTATCTCCCTGCTTGCTCCTGTAATGGGCTCTGAAATCACTTGTTCAAAATTGTTGCCTGTTGTTGCTGCTGCATCAAAAGACAGAGTGCCCAACATAAAGTTCAATGTGGCAAAGGTATTAGAATCCATCTTCCCCATCGTTGATCAGTCTGTGGTGGAAAAGACAATCCGTCCATGTCTGGTTGAGCTCAGTGAGGATCCTGATGTTGACGTGCGATTTTTTTCCAACCAAGCTCTACAAGCAATTGATCATGTCATGATGTCTAGCTAG 1845 0.4374 MVLGFSISLNRKESTLSQEQKYWEQNKMSMADEPLYPIAVLIDELKNDDIQLRLNSIRRISTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHASVLLPPLETLCSVEETCVRDKAVESLCRIGSQMRESDLIEYFIPLVKRLAAGEWFTARVSACGLFHIAYSSAPETSKTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYTHLKADIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILNPDLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIIPQVLEMISNPHYLYRMTILRAISLLAPVMGSEITCSKLLPVVAAASKDRVPNIKFNVAKVLESIFPIVDQSVVEKTIRPCLVELSEDPDVDVRFFSNQALQAIDHVMMSS* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 308 346 IPR021133 -
Rops6g03326 614 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 31 609 - -
Rops6g03326 614 Pfam HEAT repeats 388 488 - -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 37 75 IPR021133 -
Rops6g03326 614 SUPERFAMILY ARM repeat 35 607 IPR016024 -
Rops6g03326 614 Gene3D - 29 610 IPR011989 -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 269 307 IPR021133 -
Rops6g03326 614 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 29 608 - -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 542 580 IPR021133 -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 230 268 IPR021133 -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 191 229 IPR021133 -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 503 541 IPR021133 -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 347 385 IPR021133 -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 581 614 IPR021133 -
Rops6g03326 614 Pfam HEAT repeat 269 297 IPR000357 GO:0005515
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 425 463 IPR021133 -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 464 502 IPR021133 -
Rops6g03326 614 ProSiteProfiles HEAT repeat profile. 386 424 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03326 Rops-Chr6 57722437 57729932 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03326 6 57722437 57729932 Rops6g03326 6 57722437 57729932 ECH