Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03304 ATGGAGCTATCTGTGACACTCACATTCCGATCACACACCCTCTACCCCTTCTCATCCAACCACCCACTTGATCACCCAATAATACCCATTTCACCAAAACTCAAGAAACCCACTTCACTCACCGTCAGGGCCAAGAAAAAGTCAATCATTGAAGGTGTTGGCGACGAGTTGAACGCCATCGCTTCTCAGAACCTGGACTTTGCACCCTCTCGGAGACGGGTTCGTGCAGCATTCACAGAGGTGCAGCAGCAACTGGACCATTACTTATTCAAGACTGCTCCTGCTGGGATCAAGACTGATGAATGGTATGAAAGGAATTCAAGAGGACTGGAAATTTTCTGCAAAAGCTGGATGCCAGAACCTGGAATTCCAATCAAGGCAGCTTTGTGTTTCTGCCATGGGTATGGAAGTACTTGCACTTTCTTCTTTGAAGGTATTGCCAAGCGAATTGCTGCTTCTGGGTTTGGTGTTTATGCAATGGACTACCCGGGTTTTGGTCTATCCGAAGGATTACATGGTTACATTCCAAATTTTGATGATTTGGTCGATGATGTTATAGAACATTATACAAAAGTTAAAGCAAGGCCAGAGGTGAGAGAGTTGCCTCAATTTATATTGGGGCAGTCGATGGGTGGAGCAATTGCTATTAAAGTTCATTTGAAGAAACCAAATGATTGGGATGGATTAATCCTAGTAGCACCAATGTGTAAAATTGCAGGAGAGGTGCTACCATCAACAACAGTTTTGAAGGTATTAAATCTTTTGTCTAAAGTTATGCCAAAGGCAAAACTGTTCCCACACAAAGATCTATCTAAGCTGACTTTCCGAGATCCTGGCAAGAGAAAATTGGCCATTTACAATGTTATTTCTTATGATGATCGAACACGATTGAAAACTGGCATGGAACTTTTAAGTGCCACTCAAGATATTGAGTCACAATTACAGAAGGTTTCAGCTCCATTATTGATTCTTCATGGGGCAGCCGATAAGGTGACAGATCCATTAGTGAGCCAATTTCTATATGAGAAAGCATCTAGCAAGGATAAGACACTAAAGATTTATGAAGGAGGTTACCACGGCATTTTGGAAGGGGAACCTGATGACAGAATTCTAGCTGTCCATAACGACATTGTTTCATGGCTGGAATTAAGGTGCTCACTTAATTGA 1167 0.4233 MELSVTLTFRSHTLYPFSSNHPLDHPIIPISPKLKKPTSLTVRAKKKSIIEGVGDELNAIASQNLDFAPSRRRVRAAFTEVQQQLDHYLFKTAPAGIKTDEWYERNSRGLEIFCKSWMPEPGIPIKAALCFCHGYGSTCTFFFEGIAKRIAASGFGVYAMDYPGFGLSEGLHGYIPNFDDLVDDVIEHYTKVKARPEVRELPQFILGQSMGGAIAIKVHLKKPNDWDGLILVAPMCKIAGEVLPSTTVLKVLNLLSKVMPKAKLFPHKDLSKLTFRDPGKRKLAIYNVISYDDRTRLKTGMELLSATQDIESQLQKVSAPLLILHGAADKVTDPLVSQFLYEKASSKDKTLKIYEGGYHGILEGEPDDRILAVHNDIVSWLELRCSLN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03304 388 SUPERFAMILY alpha/beta-Hydrolases 82 382 IPR029058 -
Rops6g03304 388 Gene3D alpha/beta hydrolase 95 385 IPR029058 -
Rops6g03304 388 PANTHER PHOSPHOLIPASE-RELATED 97 382 - -
Rops6g03304 388 PRINTS Alpha/beta hydrolase fold signature 321 335 IPR000073 -
Rops6g03304 388 PRINTS Alpha/beta hydrolase fold signature 205 218 IPR000073 -
Rops6g03304 388 PRINTS Alpha/beta hydrolase fold signature 154 169 IPR000073 -
Rops6g03304 388 FunFam Alpha/beta-Hydrolases superfamily protein 95 387 - -
Rops6g03304 388 Pfam Serine aminopeptidase, S33 125 366 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03304 Rops-Chr6 57246727 57250029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03304 46 384 Acyl Lipid Metabolism Gene Families AT1G77420 67.257 5.33e-173 486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03304 6 57246727 57250029 Rops6g03304 6 57246727 57250029 ECH