Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03268 ATGGCCTCCAGTGAAGGGAGGCGGCATCATCATGACCTTGTGCCTCTTGCTGCATTGCTTAAGAGAGAGATGAAGAGCGAGAAGATGGAGAAGCCAACAGTGAGGCTTGGACATGCTGCTCAATCTAAGAAAGGGGAGGATTACTTTCTAATTAAGACTGATTGTCAGCGAGTGCCTGGGAACTCATCATCATCCTTTTCTGTATTTGCGATCTTTGACGGACACAACGGAAATGCTGCCGCCATTTTTACAAGGGAGCATTTGTTGAATCATGTGTTGGGTGCTCTTCCTCGAGGGCTTGGTCGTGATGAGTGGTTGCAAGCTTTACCGAGGGCATTGGTTGCTGGGTTTGTTAAGACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCCACGTTTGTGATAGTGGACAGATGGACTGTGACGGTTGCATCTGTTGGAGATTCCCGTTGTATACTAGATACCCAGGGTGGTGCTGTTTCCACCTTAACTGTTGATCACAGACTCGAAGAGAATATTGAAGAGAGGGAACGCGTTACTGCAAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGCGGTACTGAGATTGGTCCCCTTCGATGCTGGCCGGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAATGCTGGAGGGAGGCTTATAATTGCTTCTGATGGCATATGGGATGCACTATCCTCGGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCCGAACTTGCATCTATGCAGGTTGTCAAGGAAGCACTAAGAACAAGAGGATTAAAGGATGATACAACGTGCATAGTAGTTGATATAATCCCACCTGATAATGAATTGCCACCAACACCTTCCCCCAAAAAGCGGAACAAGCTGAGAGATCTCTTGTTCAGGAAGAGGTCCCGCGATTCTGCTGGTAAGCTGTCAAAGAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGAAAACTCAGGGCAATCAACATCTGGCCTTTTTGTCTGTGCTGTATGCCAAGTTGATCTTGCTCCAAGTGAGGGCATCTCTGTCCACGCAGGCTCCATTTTCTCTACCAGTTCAAAGCCCTGGCAAGGTCCATTTCTATGTTCTGACTGTCGCAATAAGAAGGATGCTATGGAAGGAAAACGTCCTAGTGGAGTTAAAGTGTCATAG 1287 0.4646 MASSEGRRHHHDLVPLAALLKREMKSEKMEKPTVRLGHAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVFAIFDGHNGNAAAIFTREHLLNHVLGALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVSTLTVDHRLEENIEERERVTASGGEVGRLSIVGGTEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELASMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPSPKKRNKLRDLLFRKRSRDSAGKLSKKLSAINIVEELFEEGSAMLAERLGNDENSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCSDCRNKKDAMEGKRPSGVKVS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03268 428 SMART PP2C_4 27 295 IPR001932 -
Rops6g03268 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Rops6g03268 428 Gene3D - 36 301 IPR036457 -
Rops6g03268 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Rops6g03268 428 PANTHER PROTEIN PHOSPHATASE 40 296 IPR015655 GO:0004722|GO:0006470
Rops6g03268 428 SUPERFAMILY PP2C-like 40 297 IPR036457 -
Rops6g03268 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Rops6g03268 428 Pfam Protein phosphatase 2C 61 270 IPR001932 -
Rops6g03268 428 CDD PP2Cc 43 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03268 Rops-Chr6 56688929 56693753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03268 1 427 PP2C-type Phosphatase Gene Family AT1G68410 79.817 0.0 699
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03268 6 56688929 56693753 Rops6g03268 6 56688929 56693753 ECH