Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03238 ATGGCCGCGACGCTCTTCTCGCCTGAGAATCCAAAATCTAAAGTTTCGTCGCCTTCTCTTTCTCTCTGGAACTCATTGCTTTGTGTGAAAATGCATAACGGAGGAGGAGGTGTTGGTGGGGTTGAAGTGAAAAGGGTGTTTATAGGATCAGGATGCAACAGAATAGTGAACAACGTTTCTTGGGGTGCTTCTGGTTTTGTCTCTTTTGGAGCTCACAACGCCGTCGCTATTTTCTGCCCCAAGAGTGCTCAAATTTTGACTACTCTTCCGGGTCACAAGGCAGTTGTGAATTGTACCCACTGGCTCCCAACCAGCAAGTTTCTATTTAAAGCAAAAGAATTGGAGCAGCATTATTTGCTATCTGGAGATGCAGACGGTGTTATTATTCTTTGGGAGCTATCCCTTATTGATGGGAAGTGGAGGCAAGTGTCACAATTGCCACAATCACACAAGAAAGGTGTTACATGCATTGATGGAATTATGGTTTCTCAAACTGAGGCAATGTTTGCTTCCACTTCTTCAGATGGAACTGTTTGTATATGGGAACTGGTATTTTCACTGAAAAGCAGAGGTGACTGTAAACTATCATGCCTGGATTCTTTCTCTGTTGGTTCTAAATCTATGGTAGCGCTATCAATGGTGGAATTGCCCGGAGATAGTGGGCAAATCGTCCTTGCTATGGGAGGATTGGATAACAAGATTCACCTTTATTGTGGTGGAAGGACAGGAAAGTTTGTACATGCTTGTGAGCTGAAAGGGCATACAGATTGGATCCGAAGTTTGGACTTCTCGTTACCTATAAGCGTCAATGGGGAAGCAAACAATATTTTTCTGGTTAGTTCATCTCAAGATAAAGGCATTAGAATTTGGAAGATGACATTACGCAACTCTGTGTCCAATGGACATGGCATATACAGAAAGGAAGAAATAAGCTTGTCATCCTATATAGAAGGTCCTGTACTTGTGGCTGGTTCGTCCTCTTATCAGATATCCTTAGAATCTCTTTTAATTGGACATGAGGATTGGGTATATTCAGTGAAGTGGCAACCCCCTTTGGTTACATCCGCGGAAGGGGAGGCCTATTATCAACCACAAAGCATTTTATCTGCATCTATGGACAAGACTATGATGATCTGGCAGCCTGAAAAGACTTCTGGCGTCTGGATGAATGTAGTCACTGTTGGGGAACTAAGCCATTGTGCTCTAGGGTTCTATGGTGGCCATTGGAGCCCAAATGGAGATTCAATTTTAGCACATGGATATGGTGGATCTTTCCATCTTTGGAAAAATGTTGGTGATGATCACTGGCTGCCACAAAAGGTTCCCTCTGGTCATTTTGCATCAGTGACTGATATTGCATGGGCTAGATCTGGCGATTACATTATGTCGGTCAGTCACGACCAGACAACTAGAATTTATGCTCCATGGAAAGTTGAGGCTTCTCTCCGAGATGGAGAATTTTGGCATGAGATAGCTCGCCCTCAGGTTCATGGTCATGATATAAATTGTCTGGCAGTAGTTCATAGTAAGGGGAATCATCGTTTTGTCAGTGGAGCTGACGAGAAAGTTGCTAGAGTGTTTGAAGCCCCATTATCATTTTTGAAAACATTAAATAATGCCACTTTGAAGAAGTCTTGTTCTTCTGATGATGTCTTGGTAGACGTTCAGATTTTGGGTGCAAATATGTCAGCTCTTGGACTATCACAGAAACCTATTTATGTTCAAGCTTCACACGAGGCACCTGAAAGAAATGGGATTGATGGTCTGGACACCCTCGAAACTATTCCTGATGCAGTTCCAACTGTGTTCACTGAACCTCCGATTGAAGATCAACTGGCTTGGCATACACTCTGGCCTGAATCACACAAACTCTATGGTCATGGAAATGAACTATTTTCTTTATGCTGTGATCATAAGGGAGAGCTTGTTGCTTCTTCATGTAAGGCCCAATCTGCAGCTGTGGCAGAGGTATGGCTTTGGCAGGTTGGTTCATGGAAAGCAGTTGGCCGCTTGCAATCCCACAGCTTAACAGTGACACAGATGGAATTCTCACATGATGACAACTTTCTTTTGACTGTCTCAAGGGATCGCCAGTTCTCGGTTTTTACAATCACAAGAACAGGCACCGGTGAAATTAGTTATAGTCTTCTTGCAAGACAGGAGGGGCACAAGCGCATTATCTGGTCATGTTCTTGGAACCCACATGGTCATGAATTTGCAACCGGTTCACGGGATAAGACAGTGAAAATCTGGGGTGTAGAGAGGAAATCATCAGTTAGGCAGCTTATGACTTTACCTCAATTTATGAGTAGTGTGACAGCATTATCTTGGATTGGTCTCCATGGTAAGAAAAATGATGGACTTCTAGCCATTGGAATGGAAAATGGCCAAATAGAACTGTGGAGTTTGTCTTACAACAGAGTAGATGATGGGAGCATTGCAGCACCAGCTATGGCTGCTGTTCTTCTTGTGCGTATAGATCCTTTTATATGCCATGCTTCTACTGTAAACCGTCTGCAATGGAGGAAAAATGAGGAAGATCACACGAGTATGCAACTTGCTTCTTCTGGAGCTGATAATTGTGTAAGAGTGTTTGATGTAACTATTGAGTAA 2613 0.4313 MAATLFSPENPKSKVSSPSLSLWNSLLCVKMHNGGGGVGGVEVKRVFIGSGCNRIVNNVSWGASGFVSFGAHNAVAIFCPKSAQILTTLPGHKAVVNCTHWLPTSKFLFKAKELEQHYLLSGDADGVIILWELSLIDGKWRQVSQLPQSHKKGVTCIDGIMVSQTEAMFASTSSDGTVCIWELVFSLKSRGDCKLSCLDSFSVGSKSMVALSMVELPGDSGQIVLAMGGLDNKIHLYCGGRTGKFVHACELKGHTDWIRSLDFSLPISVNGEANNIFLVSSSQDKGIRIWKMTLRNSVSNGHGIYRKEEISLSSYIEGPVLVAGSSSYQISLESLLIGHEDWVYSVKWQPPLVTSAEGEAYYQPQSILSASMDKTMMIWQPEKTSGVWMNVVTVGELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGDDHWLPQKVPSGHFASVTDIAWARSGDYIMSVSHDQTTRIYAPWKVEASLRDGEFWHEIARPQVHGHDINCLAVVHSKGNHRFVSGADEKVARVFEAPLSFLKTLNNATLKKSCSSDDVLVDVQILGANMSALGLSQKPIYVQASHEAPERNGIDGLDTLETIPDAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDHKGELVASSCKAQSAAVAEVWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNFLLTVSRDRQFSVFTITRTGTGEISYSLLARQEGHKRIIWSCSWNPHGHEFATGSRDKTVKIWGVERKSSVRQLMTLPQFMSSVTALSWIGLHGKKNDGLLAIGMENGQIELWSLSYNRVDDGSIAAPAMAAVLLVRIDPFICHASTVNRLQWRKNEEDHTSMQLASSGADNCVRVFDVTIE* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03238 870 ProSiteProfiles Trp-Asp (WD) repeats profile. 442 473 IPR001680 GO:0005515
Rops6g03238 870 SUPERFAMILY WD40 repeat-like 50 380 IPR036322 GO:0005515
Rops6g03238 870 ProSiteProfiles Trp-Asp (WD) repeats profile. 671 704 IPR001680 GO:0005515
Rops6g03238 870 ProSiteProfiles Trp-Asp (WD) repeats profile. 720 761 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 664 703 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 139 182 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 82 132 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 713 752 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 242 291 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 435 474 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 484 528 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 617 661 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 329 380 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 758 802 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 390 429 IPR001680 GO:0005515
Rops6g03238 870 SMART WD40_4 822 866 IPR001680 GO:0005515
Rops6g03238 870 PANTHER ELONGATOR COMPLEX PROTEIN 2 44 868 IPR037289 GO:0002098|GO:0033588
Rops6g03238 870 Pfam WD domain, G-beta repeat 84 131 IPR001680 GO:0005515
Rops6g03238 870 Pfam WD domain, G-beta repeat 438 473 IPR001680 GO:0005515
Rops6g03238 870 Pfam WD domain, G-beta repeat 148 181 IPR001680 GO:0005515
Rops6g03238 870 Pfam WD domain, G-beta repeat 250 291 IPR001680 GO:0005515
Rops6g03238 870 Pfam WD domain, G-beta repeat 336 379 IPR001680 GO:0005515
Rops6g03238 870 Pfam WD domain, G-beta repeat 721 751 IPR001680 GO:0005515
Rops6g03238 870 SUPERFAMILY WD40 repeat-like 221 804 IPR036322 GO:0005515
Rops6g03238 870 Gene3D - 439 552 IPR015943 GO:0005515
Rops6g03238 870 Gene3D - 608 712 IPR015943 GO:0005515
Rops6g03238 870 Gene3D - 320 438 IPR015943 GO:0005515
Rops6g03238 870 ProSiteProfiles Trp-Asp (WD) repeats profile. 251 300 IPR001680 GO:0005515
Rops6g03238 870 Gene3D - 16 184 IPR015943 GO:0005515
Rops6g03238 870 Gene3D - 713 869 IPR015943 GO:0005515
Rops6g03238 870 FunFam Elongator acetyltransferase complex subunit 2 399 709 - -
Rops6g03238 870 Gene3D - 194 303 IPR015943 GO:0005515
Rops6g03238 870 PRINTS G protein beta WD-40 repeat signature 367 381 IPR020472 -
Rops6g03238 870 PRINTS G protein beta WD-40 repeat signature 739 753 IPR020472 -
Rops6g03238 870 PRINTS G protein beta WD-40 repeat signature 278 292 IPR020472 -
Rops6g03238 870 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 720 754 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03238 6 56267959 56273643 Rops6g03238 6 56267959 56273643 ECH